ERROR in runSCENIC_2_createRegulons

aertslab / SCENIC

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.

http://scenic.aertslab.org

GNU General Public License v3.0

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ERROR in runSCENIC_2_createRegulons #210

Open ryrl970311 opened 2 years ago

ryrl970311 commented 2 years ago

why runSCENIC_2_createRegulons is always ERROR Error in runSCENIC_2_createRegulons(scenicOptions = ScenicOptions, coexMethod = c("top5perTarget")) : It is not possible to load the following databses: hg38refseq-r8010kb_up_and_down_tss.mc9nr.feather

s-aibar commented 2 years ago

Probably because you have not updated the path properly (i.e. taking into account in which directory you are running it)...?

Morpheusaaa commented 1 year ago

I have the same question Error in runSCENIC_2_createRegulons(scenicOptions, coexMethod = c("top5perTarget")) : It is not possible to load the following databses: hg19-500bp-upstream-7species.mc9nr.feather