search

aertslab / arboreto

A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.
BSD 3-Clause "New" or "Revised" License
54 stars 25 forks source link

requirements.txt is missing from PyPI source tarball #33

Open boegel opened 1 year ago

boegel commented 1 year ago

requirements.txt is required by setup.py, but it's missing from the PyPI source tarball, which leads to the following when trying to install arboreto 0.1.6 from source:

    Running command python setup.py egg_info
    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/tmp/eb-hq4sf4y2/pip-req-build-q_upe322/setup.py", line 17, in <module>
        install_requires=read_requirements('requirements.txt'),
      File "/tmp/eb-hq4sf4y2/pip-req-build-q_upe322/setup.py", line 4, in read_requirements
        with open(fname, 'r', encoding='utf-8') as file:
    FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
felipehidra commented 1 year ago

Same issue here!

naddsch commented 4 months ago

I am also running into that issue when trying to install from github