Add a detection method for unintended inversion

akikuno / DAJIN2

🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing

MIT License

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Add a detection method for unintended inversion #31

Open akikuno opened 1 month ago

akikuno commented 1 month ago

Is your feature request related to a problem? Please describe.

DAJIN2 v0.5.0 does not consider the detection sensitivity for unintended inversion alleles.

Describe the solution you'd like

Currently, there is no script to extract unintended inversions, so a dedicated script for detecting inversions should be prepared, referring to insertions_to_fasta.py.

Describe alternatives you've considered if you have any

None

Additional context

None

akikuno commented 2 weeks ago

[ ] Add example_inversion to example directory