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akoyabio / phenoptrReports

Create analysis reports from inForm data.
https://akoyabio.github.io/phenoptrReports
zlib License
15 stars 7 forks source link

PhenoprReports update-spatial map viewer not working #52

Closed aakoya closed 3 years ago

aakoya commented 3 years ago

I updated phenoptrReports yesterday, and I'm no longer able to use the spatial map viewer with a data set that worked previously. I've attached the error I received when trying to run this addin spatial viewer error .

AB-Kent commented 3 years ago

This was fixed by upgrading inForm to version 2.6

aehaggerty commented 3 years ago

Can I install a previous version of PR? I have customers that cannot update to the latest inform yet but would still like to utilize the phenoptrReports spatial map viewer. Any advice on how to do this is much appreciated. Thanks!

AB-Kent commented 3 years ago

Please try the development version of phenoptr and phenoptrReports, I think this is fixed now. Let me know if it works!

Install with

remotes::install_github('akoyabio/phenoptr@9000')
remotes::install_github('akoyabio/phenoptrReports@9000')
aehaggerty commented 3 years ago

Hi Kent, That works perfectly! Thank you so much!

Best, Agnes

Agnes Haggerty, PhD | Biomarker Specialist (Americas) Email: @.**@.> Cell: 650.384.5761 Akoya Biosciences www.akoyabio.comhttp://www.akoyabio.com/

From: Kent Johnson @.> Sent: Monday, October 18, 2021 10:37 AM To: akoyabio/phenoptrReports @.> Cc: Agnes Haggerty @.>; Comment @.> Subject: Re: [akoyabio/phenoptrReports] PhenoprReports update-spatial map viewer not working (#52)

Please try the development version of phenoptr and phenoptrReports, I think this is fixed now. Let me know if it works!

Install with

@.***')

@.***')

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AB-Kent commented 3 years ago

Note: With older inForm images that do not have any metadata, the error message is Error: Result 1 must be a single string, not NULL of length 0