search

andreped / fast-stain-normalization

:star2: GPU-accelerated stain normalization command line tool
MIT License
19 stars 2 forks source link

Image format not supported #5

Closed fnurkinali closed 1 year ago

fnurkinali commented 1 year ago

Hello!

My input is a folder with png images, but I am getting image format not supported error when I am running main.py. What is the reason and how can I solve this issue?

Thank you.

andreped commented 1 year ago

Most likely you are providing paths to the image reader which does not exist. We use opencv for reading images and it has the confusing error message of giving the same error for 1) attempting to read an unsupported image type and 2) attempting to read a path that does not exist (see here for where it most likely fails).

Regarding conversion, see here for how to convert the images. I assume that the PNG images all lie in the same folder and you provide the full path to the folder of images you wish to apply stain normalization on.

Also, is it the target image or the images you wish to convert it fails to read? In your error prompt it should say whether the error was at line 72 or 73 (see here).

andreped commented 1 year ago

Closing this issue as it appears to be inactive.

If you are still having issues, please, let me know and I can address it.