[R] Arrow install on Databricks cluster takes 10+ minutes

[james-camacho-ab]

I'm installing arrow on a high concurrency cluster within Databricks, but every time the cluster spins up it seems to be taking longer and longer to install. I'm using the default repository and my Databricks Runtime is 10.1, which includes Apache Spark 3.2.0. Any feedback or suggestions are appreciated. Thanks!

[wjones127]

Hi James, is this pyarrow you are talking about? Which version are you installing? And are there any logs you can share?

[james-camacho-ab]

@wjones127 This is for conjunction with SparkR, essentially taking some Legacy code and optimizing the collects() into R dataframes so we can leverage Delta tables while making minimal changes to the existing codebase. I'm using the CRAN option to install it onto my cluster. Using arrow version 7.0.0. I looked through the driver logs and nothing immediately pops out as being relevant for the arrow install, but I can send those if you want it. Here's my cluster config as well for reference:

[wjones127]

It sounds like it's building the R package each time. Have you tried using the RStudio package manager as the repo?

In R the call would be:

install.packages("arrow", repos = "https://packagemanager.rstudio.com/all/__linux__/focal/latest")

It looks like in the Databricks UI you can set the repo.

[james-camacho-ab]

@wjones127 I've been letting the install run for a while now but it seems to be stuck on "pending" Not sure if the OS needs to be switched in the URL or if it's another issue

[wjones127]

Hmm yeah that's odd. Is focal not the right OS name for DBR 10.1?

Might be worth trying the notebook-scoped command and see if that works. Should at least get better logs.

I'd recomend taking the arrow package off the cluster config, and then starting up the cluster and running:

install.packages("arrow")
install.packages("arrow", repos = "https://packagemanager.rstudio.com/all/__linux__/focal/latest")

And see how the time and output compare between the two. I suspect the first is building the C++ code, while the latter (if it works) should not be.

[eitsupi]

To use RStudio Package Manager, we needs to set up the UA header. Please check this page. https://docs.rstudio.com/rspm/admin/serving-binaries/#binary-user-agents

[james-camacho-ab]

@wjones127 Here's the logs from running install.packages("arrow", repos = "https://packagemanager.rstudio.com/all/__linux__/focal/latest"). Ran in ~16 minutes ` installing source* package ‘arrow’ ... package ‘arrow’ successfully unpacked and MD5 sums checked using staged installation **** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED trying URL 'https://github.com' downloaded 203 KB

Using ubuntu-18.04 binary for ubuntu-20.04 trying URL 'https://arrow-r-nightly.s3.amazonaws.com/libarrow/bin/ubuntu-18.04/arrow-7.0.0.zip' Error in download.file(from_url, to_file, quiet = quietly) : cannot open URL 'https://arrow-r-nightly.s3.amazonaws.com/libarrow/bin/ubuntu-18.04/arrow-7.0.0.zip' No libarrow binary found for version 7.0.0 on ubuntu-18.04 Found local C++ source: 'tools/cpp' Building libarrow from source For a faster, more complete installation, set the environment variable NOT_CRAN=true before installing See install vignette for details: https://cran.r-project.org/web/packages/arrow/vignettes/install.html * Building with MAKEFLAGS= -j2 ** arrow with SOURCE_DIR='tools/cpp' BUILD_DIR='/tmp/RtmpRLVXZh/file20721bb0e480' DEST_DIR='libarrow/arrow-7.0.0' CMAKE='/usr/bin/cmake' EXTRA_CMAKE_FLAGS='' CC='gcc -std=gnu99' CXX='g++ -std=gnu++11' LDFLAGS='-Wl,-Bsymbolic-functions -Wl,-z,relro' ARROW_S3='ON' ARROW_MIMALLOC='ON' ++ pwd

• : /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow
• : tools/cpp
• : /tmp/RtmpRLVXZh/file20721bb0e480
• : libarrow/arrow-7.0.0
• : /usr/bin/cmake ++ cd tools/cpp ++ pwd
• SOURCE_DIR=/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/tools/cpp ++ mkdir -p libarrow/arrow-7.0.0 ++ cd libarrow/arrow-7.0.0 ++ pwd
• DEST_DIR=/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0
• '[' false '!=' '' ']' ++ echo false ++ tr '[:upper:]' '[:lower:]'
• LIBARROW_MINIMAL=false
• '[' false = false ']'
• ARROW_DEFAULT_PARAM=ON
• mkdir -p /tmp/RtmpRLVXZh/file20721bb0e480
• pushd /tmp/RtmpRLVXZh/file20721bb0e480 /tmp/RtmpRLVXZh/file20721bb0e480 /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow
• /usr/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=BUNDLED -DAWSSDK_SOURCE= -DARROW_FILESYSTEM=ON -DARROW_JEMALLOC=ON -DARROW_MIMALLOC=ON -DARROW_JSON=ON -DARROW_PARQUET=ON -DARROW_S3=ON -DARROW_WITH_BROTLI=ON -DARROW_WITH_BZ2=ON -DARROW_WITH_LZ4=ON -DARROW_WITH_RE2=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_UTF8PROC=ON -DARROW_WITH_ZLIB=ON -DARROW_WITH_ZSTD=ON -DARROW_VERBOSE_THIRDPARTY_BUILD=OFF -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=OFF -G 'Unix Makefiles' /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/tools/cpp -- Building using CMake version: 3.16.3 -- The C compiler identification is GNU 9.4.0 -- The CXX compiler identification is GNU 9.4.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Arrow version: 7.0.0 (full: '7.0.0') -- Arrow SO version: 700 (full: 700.0.0) -- clang-tidy 12 not found -- clang-format 12 not found -- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN) -- infer not found fatal: not a git repository (or any of the parent directories): .git -- Found Python3: /databricks/python3/bin/python3.8 (found version "3.8.10") found components: Interpreter -- Found cpplint executable at /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/tools/cpp/build-support/cpplint.py -- System processor: x86_64 -- Performing Test CXX_SUPPORTS_SSE4_2 -- Performing Test CXX_SUPPORTS_SSE4_2 - Success -- Performing Test CXX_SUPPORTS_AVX2 -- Performing Test CXX_SUPPORTS_AVX2 - Success -- Performing Test CXX_SUPPORTS_AVX512 -- Performing Test CXX_SUPPORTS_AVX512 - Success -- Arrow build warning level: PRODUCTION Using ld linker Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...}) -- Build Type: RELEASE -- Using BUNDLED approach to find dependencies -- ARROW_ABSL_BUILD_VERSION: 20210324.2 -- ARROW_ABSL_BUILD_SHA256_CHECKSUM: 59b862f50e710277f8ede96f083a5bb8d7c9595376146838b9580be90374ee1f -- ARROW_AWSSDK_BUILD_VERSION: 1.8.133 -- ARROW_AWSSDK_BUILD_SHA256_CHECKSUM: d6c495bc06be5e21dac716571305d77437e7cfd62a2226b8fe48d9ab5785a8d6 -- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.12 -- ARROW_AWS_CHECKSUMS_BUILD_SHA256_CHECKSUM: 394723034b81cc7cd528401775bc7aca2b12c7471c92350c80a0e2fb9d2909fe -- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.6.9 -- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 928a3e36f24d1ee46f9eec360ec5cebfe8b9b8994fe39d4fa74ff51aebb12717 -- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.1.5 -- ARROW_AWS_C_EVENT_STREAM_BUILD_SHA256_CHECKSUM: f1b423a487b5d6dca118bfc0d0c6cc596dc476b282258a3228e73a8f730422d4 -- ARROW_BOOST_BUILD_VERSION: 1.75.0 -- ARROW_BOOST_BUILD_SHA256_CHECKSUM: 267e04a7c0bfe85daf796dedc789c3a27a76707e1c968f0a2a87bb96331e2b61 -- ARROW_BROTLI_BUILD_VERSION: v1.0.9 -- ARROW_BROTLI_BUILD_SHA256_CHECKSUM: f9e8d81d0405ba66d181529af42a3354f838c939095ff99930da6aa9cdf6fe46 -- ARROW_BZIP2_BUILD_VERSION: 1.0.8 -- ARROW_BZIP2_BUILD_SHA256_CHECKSUM: ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269 -- ARROW_CARES_BUILD_VERSION: 1.17.2 -- ARROW_CARES_BUILD_SHA256_CHECKSUM: 4803c844ce20ce510ef0eb83f8ea41fa24ecaae9d280c468c582d2bb25b3913d -- ARROW_CRC32C_BUILD_VERSION: 1.1.2 -- ARROW_CRC32C_BUILD_SHA256_CHECKSUM: ac07840513072b7fcebda6e821068aa04889018f24e10e46181068fb214d7e56 -- ARROW_GBENCHMARK_BUILD_VERSION: v1.6.0 -- ARROW_GBENCHMARK_BUILD_SHA256_CHECKSUM: 1f71c72ce08d2c1310011ea6436b31e39ccab8c2db94186d26657d41747c85d6 -- ARROW_GFLAGS_BUILD_VERSION: v2.2.2 -- ARROW_GFLAGS_BUILD_SHA256_CHECKSUM: 34af2f15cf7367513b352bdcd2493ab14ce43692d2dcd9dfc499492966c64dcf -- ARROW_GLOG_BUILD_VERSION: v0.5.0 -- ARROW_GLOG_BUILD_SHA256_CHECKSUM: eede71f28371bf39aa69b45de23b329d37214016e2055269b3b5e7cfd40b59f5 -- ARROW_GOOGLE_CLOUD_CPP_BUILD_VERSION: v1.35.0 -- ARROW_GOOGLE_CLOUD_CPP_BUILD_SHA256_CHECKSUM: e4e9eac1e7999eff195db270bc2a719004660b3730ebb5d2f444f2d2057e49b2 -- ARROW_GRPC_BUILD_VERSION: v1.35.0 -- ARROW_GRPC_BUILD_SHA256_CHECKSUM: 27dd2fc5c9809ddcde8eb6fa1fa278a3486566dfc28335fca13eb8df8bd3b958 -- ARROW_GTEST_BUILD_VERSION: 1.11.0 -- ARROW_GTEST_BUILD_SHA256_CHECKSUM: b4870bf121ff7795ba20d20bcdd8627b8e088f2d1dab299a031c1034eddc93d5 -- ARROW_JEMALLOC_BUILD_VERSION: 5.2.1 -- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 34330e5ce276099e2e8950d9335db5a875689a4c6a56751ef3b1d8c537f887f6 -- ARROW_LZ4_BUILD_VERSION: 8f61d8eb7c6979769a484cde8df61ff7c4c77765 -- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 5b072d848f2f93fddb97e1143e22c1bd7fa19fc8431ee69e21758190a88125b4 -- ARROW_MIMALLOC_BUILD_VERSION: v1.7.3 -- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: 0f987bda01ca9df87ec90e9d98c63fa893ee61f3cca565e5ca5ed744fdcc5109 -- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.10.2 -- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 081ed0f9f89805c2d96335c3acfa993b39a0a5b4b4cef7edb68dd2210a13458c -- ARROW_OPENTELEMETRY_BUILD_VERSION: v1.1.0 -- ARROW_OPENTELEMETRY_BUILD_SHA256_CHECKSUM: f8fd3adddd47be382dc79c19d7e7efcf86a0dfbb5a237db6e0618dbb7eb8e058 -- ARROW_OPENTELEMETRY_PROTO_BUILD_VERSION: v0.11.0 -- ARROW_OPENTELEMETRY_PROTO_BUILD_SHA256_CHECKSUM: 985367f8905e91018e636cbf0d83ab3f834b665c4f5899a27d10cae9657710e2 -- ARROW_ORC_BUILD_VERSION: 1.7.2 -- ARROW_ORC_BUILD_SHA256_CHECKSUM: ef39bae755116fecb07fb4334656f984ba8ce7cdb1c64de078d3ed186b286007 -- ARROW_PROTOBUF_BUILD_VERSION: v3.18.1 -- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: b8ab9bbdf0c6968cf20060794bc61e231fae82aaf69d6e3577c154181991f576 -- ARROW_RAPIDJSON_BUILD_VERSION: 1a803826f1197b5e30703afe4b9c0e7dd48074f5 -- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: 0b6b780b6c534bfb0b23d29910bfe361e486bcfeaf106db8bc8995792072905a -- ARROW_RE2_BUILD_VERSION: 2021-11-01 -- ARROW_RE2_BUILD_SHA256_CHECKSUM: 8c45f7fba029ab41f2a7e6545058d9eec94eef97ce70df58e92d85cfc08b4669 -- ARROW_SNAPPY_BUILD_VERSION: 1.1.9 -- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 75c1fbb3d618dd3a0483bff0e26d0a92b495bbe5059c8b4f1c962b478b6e06e7 -- ARROW_SNAPPY_OLD_BUILD_VERSION: 1.1.8 -- ARROW_SNAPPY_OLD_BUILD_SHA256_CHECKSUM: 16b677f07832a612b0836178db7f374e414f94657c138e6993cbfc5dcc58651f -- ARROW_THRIFT_BUILD_VERSION: 0.13.0 -- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: 7ad348b88033af46ce49148097afe354d513c1fca7c607b59c33ebb6064b5179 -- ARROW_UTF8PROC_BUILD_VERSION: v2.7.0 -- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 4bb121e297293c0fd55f08f83afab6d35d48f0af4ecc07523ad8ec99aa2b12a1 -- ARROW_XSIMD_BUILD_VERSION: aeec9c872c8b475dedd7781336710f2dd2666cb2 -- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: 0a841e6c8acf216150e4fc19fca8e29fbab9614b56ac7b96e56019264ca27b26 -- ARROW_ZLIB_BUILD_VERSION: 1.2.11 -- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: c3e5e9fdd5004dcb542feda5ee4f0ff0744628baf8ed2dd5d66f8ca1197cb1a1 -- ARROW_ZSTD_BUILD_VERSION: v1.5.1 -- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: dc05773342b28f11658604381afd22cb0a13e8ba17ff2bd7516df377060c18dd -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Check if compiler accepts -pthread -- Check if compiler accepts -pthread - yes -- Found Threads: TRUE
  -- Looking for _M_ARM64 -- Looking for _M_ARM64 - not found -- Looking for SIZEOF_INT128 -- Looking for SIZEOF_INT128 - found -- Boost include dir: /tmp/RtmpRLVXZh/file20721bb0e480/boost_ep-prefix/src/boost_ep -- Boost libraries: boost_system_static;boost_filesystem_static -- Building snappy from source -- Building brotli from source -- Found OpenSSL: /usr/lib/x86_64-linux-gnu/libcrypto.so (found suitable version "1.1.1f", minimum required is "1.0.2")
  -- Found OpenSSL Crypto Library: /usr/lib/x86_64-linux-gnu/libcrypto.so -- Building with OpenSSL (Version: 1.1.1f) support Building Apache Thrift from source -- Building (vendored) jemalloc from source -- Building (vendored) mimalloc from source -- Building RapidJSON from source -- Building xsimd from source -- Building ZLIB from source -- Building lz4 from source -- Building zstd from source -- Building RE2 from source -- Building BZip2 from source -- Building utf8proc from source -- Found hdfs.h at: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/tools/cpp/thirdparty/hadoop/include/hdfs.h Building AWS C++ SDK from source -- Found CURL: /usr/lib/x86_64-linux-gnu/libcurl.so (found version "7.68.0")
  -- Found AWS SDK headers: /tmp/RtmpRLVXZh/file20721bb0e480/awssdk_ep-install/include -- Found AWS SDK libraries: aws-cpp-sdk-identity-management;aws-cpp-sdk-sts;aws-cpp-sdk-cognito-identity;aws-cpp-sdk-s3;aws-cpp-sdk-core;AWS::aws-c-event-stream;AWS::aws-checksums;AWS::aws-c-common -- All bundled static libraries: Snappy::snappy;Brotli::brotlicommon;Brotli::brotlienc;Brotli::brotlidec;thrift::thrift;jemalloc::jemalloc;mimalloc::mimalloc;ZLIB::ZLIB;LZ4::lz4;zstd::libzstd;re2::re2;BZip2::BZip2;utf8proc::utf8proc;aws-cpp-sdk-identity-management;aws-cpp-sdk-sts;aws-cpp-sdk-cognito-identity;aws-cpp-sdk-s3;aws-cpp-sdk-core;AWS::aws-c-event-stream;AWS::aws-checksums;AWS::aws-c-common -- CMAKE_C_FLAGS: -O3 -DNDEBUG -Wall -fno-semantic-interposition -msse4.2 -- CMAKE_CXX_FLAGS: -Wno-noexcept-type -fdiagnostics-color=always -O3 -DNDEBUG -Wall -fno-semantic-interposition -msse4.2 -- Looking for backtrace -- Looking for backtrace - found -- backtrace facility detected in default set of libraries -- Found Backtrace: /usr/include
  -- Creating bundled static library target arrow_bundled_dependencies at /tmp/RtmpRLVXZh/file20721bb0e480/release/libarrow_bundled_dependencies.a

  ---

  -- Arrow version: 7.0.0 -- -- Build configuration summary: -- Generator: Unix Makefiles -- Build type: RELEASE -- Source directory: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/tools/cpp -- Install prefix: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0 -- -- Compile and link options: -- -- ARROW_CXXFLAGS="" [default=""] -- Compiler flags to append when compiling Arrow -- ARROW_BUILD_STATIC=ON [default=ON] -- Build static libraries -- ARROW_BUILD_SHARED=OFF [default=ON] -- Build shared libraries -- ARROW_PACKAGE_KIND="" [default=""] -- Arbitrary string that identifies the kind of package -- (for informational purposes) -- ARROW_GIT_ID="" [default=""] -- The Arrow git commit id (if any) -- ARROW_GIT_DESCRIPTION="" [default=""] -- The Arrow git commit description (if any) -- ARROW_NO_DEPRECATED_API=OFF [default=OFF] -- Exclude deprecated APIs from build -- ARROW_USE_CCACHE=ON [default=ON] -- Use ccache when compiling (if available) -- ARROW_USE_LD_GOLD=OFF [default=OFF] -- Use ld.gold for linking on Linux (if available) -- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF] -- Use precompiled headers when compiling -- ARROW_SIMD_LEVEL=SSE4_2 [default=NONE	SSE4_2	AVX2	AVX512	NEON	DEFAULT] -- Compile-time SIMD optimization level -- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=NONE	SSE4_2	AVX2	AVX512	MAX] -- Max runtime SIMD optimization level -- ARROW_ARMV8_ARCH=armv8-a [default=armv8-a	armv8-a+crc+crypto] -- Arm64 arch and extensions -- ARROW_ALTIVEC=ON [default=ON] -- Build with Altivec if compiler has support -- ARROW_RPATH_ORIGIN=OFF [default=OFF] -- Build Arrow libraries with RATH set to $ORIGIN -- ARROW_INSTALL_NAME_RPATH=ON [default=ON] -- Build Arrow libraries with install_name set to @rpath -- ARROW_GGDB_DEBUG=ON [default=ON] -- Pass -ggdb flag to debug builds

  -- Test and benchmark options: -- -- ARROW_BUILD_EXAMPLES=OFF [default=OFF] -- Build the Arrow examples -- ARROW_BUILD_TESTS=OFF [default=OFF] -- Build the Arrow googletest unit tests -- ARROW_ENABLE_TIMING_TESTS=ON [default=ON] -- Enable timing-sensitive tests -- ARROW_BUILD_INTEGRATION=OFF [default=OFF] -- Build the Arrow integration test executables -- ARROW_BUILD_BENCHMARKS=OFF [default=OFF] -- Build the Arrow micro benchmarks -- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF] -- Build the Arrow micro reference benchmarks -- ARROW_BUILD_OPENMP_BENCHMARKS=OFF [default=OFF] -- Build the Arrow benchmarks that rely on OpenMP -- ARROW_BUILD_DETAILED_BENCHMARKS=OFF [default=OFF] -- Build benchmarks that do a longer exploration of performance -- ARROW_TEST_LINKAGE=static [default=shared

  static] -- Linkage of Arrow libraries with unit tests executables. -- ARROW_FUZZING=OFF [default=OFF] -- Build Arrow Fuzzing executables -- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF] -- Enable unit tests which use large memory

  -- Lint options: -- -- ARROW_ONLY_LINT=OFF [default=OFF] -- Only define the lint and check-format targets -- ARROW_VERBOSE_LINT=OFF [default=OFF] -- If off, 'quiet' flags will be passed to linting tools -- ARROW_GENERATE_COVERAGE=OFF [default=OFF] -- Build with C++ code coverage enabled -- -- Checks options: -- -- ARROW_TEST_MEMCHECK=OFF [default=OFF] -- Run the test suite using valgrind --tool=memcheck -- ARROW_USE_ASAN=OFF [default=OFF] -- Enable Address Sanitizer checks -- ARROW_USE_TSAN=OFF [default=OFF] -- Enable Thread Sanitizer checks -- ARROW_USE_UBSAN=OFF [default=OFF] -- Enable Undefined Behavior sanitizer checks -- -- Project component options: -- -- ARROW_BUILD_UTILITIES=OFF [default=OFF] -- Build Arrow commandline utilities -- ARROW_COMPUTE=ON [default=OFF] -- Build the Arrow Compute Modules -- ARROW_CSV=ON [default=OFF] -- Build the Arrow CSV Parser Module -- ARROW_CUDA=OFF [default=OFF] -- Build the Arrow CUDA extensions (requires CUDA toolkit) -- ARROW_DATASET=ON [default=OFF] -- Build the Arrow Dataset Modules -- ARROW_ENGINE=OFF [default=OFF] -- Build the Arrow Execution Engine -- ARROW_FILESYSTEM=ON [default=OFF] -- Build the Arrow Filesystem Layer -- ARROW_FLIGHT=OFF [default=OFF] -- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers) -- ARROW_FLIGHT_SQL=OFF [default=OFF] -- Build the Arrow Flight SQL extension -- ARROW_GANDIVA=OFF [default=OFF] -- Build the Gandiva libraries -- ARROW_GCS=OFF [default=OFF] -- Build Arrow with GCS support (requires the GCloud SDK for C++) -- ARROW_HDFS=OFF [default=OFF] -- Build the Arrow HDFS bridge -- ARROW_HIVESERVER2=OFF [default=OFF] -- Build the HiveServer2 client and Arrow adapter -- ARROW_IPC=ON [default=ON] -- Build the Arrow IPC extensions -- ARROW_JEMALLOC=ON [default=ON] -- Build the Arrow jemalloc-based allocator -- ARROW_JNI=OFF [default=OFF] -- Build the Arrow JNI lib -- ARROW_JSON=ON [default=OFF] -- Build Arrow with JSON support (requires RapidJSON) -- ARROW_MIMALLOC=ON [default=OFF] -- Build the Arrow mimalloc-based allocator -- ARROW_PARQUET=ON [default=OFF] -- Build the Parquet libraries -- ARROW_ORC=OFF [default=OFF] -- Build the Arrow ORC adapter -- ARROW_PLASMA=OFF [default=OFF] -- Build the plasma object store along with Arrow -- ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF] -- Build the plasma object store java client -- ARROW_PYTHON=OFF [default=OFF] -- Build the Arrow CPython extensions -- ARROW_S3=ON [default=OFF] -- Build Arrow with S3 support (requires the AWS SDK for C++) -- ARROW_SKYHOOK=OFF [default=OFF] -- Build the Skyhook libraries -- ARROW_TENSORFLOW=OFF [default=OFF] -- Build Arrow with TensorFlow support enabled -- ARROW_TESTING=OFF [default=OFF] -- Build the Arrow testing libraries -- -- Thirdparty toolchain options: -- -- ARROW_DEPENDENCY_SOURCE=BUNDLED [default=AUTO	BUNDLED	SYSTEM	CONDA	VCPKG	BREW] -- Method to use for acquiring arrow's build dependencies -- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF] -- Show output from ExternalProjects rather than just logging to files -- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON] -- Link to shared libraries -- ARROW_BOOST_USE_SHARED=OFF [default=ON] -- Rely on boost shared libraries where relevant -- ARROW_BROTLI_USE_SHARED=ON [default=ON] -- Rely on Brotli shared libraries where relevant -- ARROW_BZ2_USE_SHARED=ON [default=ON] -- Rely on Bz2 shared libraries where relevant -- ARROW_GFLAGS_USE_SHARED=ON [default=ON] -- Rely on GFlags shared libraries where relevant -- ARROW_GRPC_USE_SHARED=ON [default=ON] -- Rely on gRPC shared libraries where relevant -- ARROW_LZ4_USE_SHARED=ON [default=ON] -- Rely on lz4 shared libraries where relevant -- ARROW_OPENSSL_USE_SHARED=ON [default=ON] -- Rely on OpenSSL shared libraries where relevant -- ARROW_PROTOBUF_USE_SHARED=ON [default=ON] -- Rely on Protocol Buffers shared libraries where relevant -- ARROW_THRIFT_USE_SHARED=ON [default=ON] -- Rely on thrift shared libraries where relevant -- ARROW_UTF8PROC_USE_SHARED=ON [default=ON] -- Rely on utf8proc shared libraries where relevant -- ARROW_SNAPPY_USE_SHARED=ON [default=ON] -- Rely on snappy shared libraries where relevant -- ARROW_UTF8PROC_USE_SHARED=ON [default=ON] -- Rely on utf8proc shared libraries where relevant -- ARROW_ZSTD_USE_SHARED=ON [default=ON] -- Rely on zstd shared libraries where relevant -- ARROW_USE_GLOG=OFF [default=OFF] -- Build libraries with glog support for pluggable logging -- ARROW_WITH_BACKTRACE=ON [default=ON] -- Build with backtrace support -- ARROW_WITH_OPENTELEMETRY=OFF [default=OFF] -- Build libraries with OpenTelemetry support for distributed tracing -- ARROW_WITH_BROTLI=ON [default=OFF] -- Build with Brotli compression -- ARROW_WITH_BZ2=ON [default=OFF] -- Build with BZ2 compression -- ARROW_WITH_LZ4=ON [default=OFF] -- Build with lz4 compression -- ARROW_WITH_SNAPPY=ON [default=OFF] -- Build with Snappy compression -- ARROW_WITH_ZLIB=ON [default=OFF] -- Build with zlib compression -- ARROW_WITH_ZSTD=ON [default=OFF] -- Build with zstd compression -- ARROW_WITH_UTF8PROC=ON [default=ON] -- Build with support for Unicode properties using the utf8proc library -- (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON) -- ARROW_WITH_RE2=ON [default=ON] -- Build with support for regular expressions using the re2 library -- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)

  -- Parquet options: -- -- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF] -- Depend only on Thirdparty headers to build libparquet. -- Always OFF if building binaries -- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF] -- Build the Parquet executable CLI tools. Requires static libraries to be built. -- PARQUET_BUILD_EXAMPLES=OFF [default=OFF] -- Build the Parquet examples. Requires static libraries to be built. -- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF] -- Build support for encryption. Fail if OpenSSL is not found -- -- Gandiva options: -- -- ARROW_GANDIVA_JAVA=OFF [default=OFF] -- Build the Gandiva JNI wrappers -- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF] -- Include -static-libstdc++ -static-libgcc when linking with -- Gandiva static libraries -- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""] -- Compiler flags to append when pre-compiling Gandiva operations -- -- Advanced developer options: -- -- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF] -- Compile with extra error context (line numbers, code) -- ARROW_OPTIONAL_INSTALL=OFF [default=OFF] -- If enabled install ONLY targets that have already been built. Please be -- advised that if this is enabled 'install' will fail silently on components -- that have not been built -- Outputting build configuration summary to /tmp/RtmpRLVXZh/file20721bb0e480/cmake_summary.json -- Configuring done -- Generating done -- Build files have been written to: /tmp/RtmpRLVXZh/file20721bb0e480

• /usr/bin/cmake --build . --target install Scanning dependencies of target jemalloc_ep Scanning dependencies of target mimalloc_ep [ 0%] Creating directories for 'mimalloc_ep' [ 1%] Creating directories for 'jemalloc_ep' [ 2%] Performing download step (download, verify and extract) for 'mimalloc_ep' [ 2%] Performing download step (download, verify and extract) for 'jemalloc_ep' -- Downloading... dst='/tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep-prefix/src/v1.7.3.tar.gz' timeout='none' -- Using src='https://github.com/microsoft/mimalloc/archive/v1.7.3.tar.gz' -- [download 100% complete] -- jemalloc_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download-*.log [ 2%] Performing patch step for 'jemalloc_ep' [ 2%] No update step for 'jemalloc_ep' -- verifying file... file='/tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep-prefix/src/v1.7.3.tar.gz' -- Downloading... done [ 3%] Performing configure step for 'jemalloc_ep' -- extracting... src='/tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep-prefix/src/v1.7.3.tar.gz' dst='/tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep-prefix/src/mimalloc_ep' -- extracting... [tar xfz] -- extracting... [analysis] -- extracting... [rename] -- extracting... [clean up] -- extracting... done [ 3%] No patch step for 'mimalloc_ep' [ 3%] No update step for 'mimalloc_ep' [ 3%] Performing configure step for 'mimalloc_ep' -- The C compiler identification is GNU 9.4.0 -- The CXX compiler identification is GNU 9.4.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- -- -- Library base name: mimalloc -- Version : 1.7 -- Build type : release -- C Compiler : /usr/bin/gcc -- Compiler flags : -Wall;-Wextra;-Wno-unknown-pragmas;-fvisibility=hidden;-Wstrict-prototypes;-Wno-invalid-memory-model;-ftls-model=local-dynamic -- Build targets : static -- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project:

  CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY

-- Build files have been written to: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep-prefix/src/mimalloc_ep-build [ 4%] Performing build step for 'mimalloc_ep' Scanning dependencies of target mimalloc-static [ 6%] Building C object CMakeFiles/mimalloc-static.dir/src/stats.c.o [ 13%] Building C object CMakeFiles/mimalloc-static.dir/src/random.c.o [ 20%] Building C object CMakeFiles/mimalloc-static.dir/src/os.c.o [ 26%] Building C object CMakeFiles/mimalloc-static.dir/src/bitmap.c.o [ 33%] Building C object CMakeFiles/mimalloc-static.dir/src/arena.c.o [ 40%] Building C object CMakeFiles/mimalloc-static.dir/src/region.c.o [ 46%] Building C object CMakeFiles/mimalloc-static.dir/src/segment.c.o [ 53%] Building C object CMakeFiles/mimalloc-static.dir/src/page.c.o [ 60%] Building C object CMakeFiles/mimalloc-static.dir/src/alloc.c.o [ 66%] Building C object CMakeFiles/mimalloc-static.dir/src/alloc-aligned.c.o [ 73%] Building C object CMakeFiles/mimalloc-static.dir/src/alloc-posix.c.o [ 80%] Building C object CMakeFiles/mimalloc-static.dir/src/heap.c.o [ 86%] Building C object CMakeFiles/mimalloc-static.dir/src/options.c.o [ 93%] Building C object CMakeFiles/mimalloc-static.dir/src/init.c.o [100%] Linking C static library libmimalloc.a [100%] Built target mimalloc-static [ 4%] Performing install step for 'mimalloc_ep' [100%] Built target mimalloc-static Install the project... -- Install configuration: "RELEASE" -- Installing: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep/src/mimalloc_ep/lib/mimalloc-1.7/libmimalloc.a -- Installing: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep/src/mimalloc_ep/include/mimalloc-1.7/mimalloc.h -- Installing: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep/src/mimalloc_ep/include/mimalloc-1.7/mimalloc-override.h -- Installing: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep/src/mimalloc_ep/include/mimalloc-1.7/mimalloc-new-delete.h -- Installing: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep/src/mimalloc_ep/share/mimalloc-1.7/cmake/mimalloc-config.cmake -- Installing: /tmp/RtmpRLVXZh/file20721bb0e480/mimalloc_ep/src/mimalloc_ep/share/mimalloc-1.7/cmake/mimalloc-config-version.cmake [ 4%] Completed 'mimalloc_ep' [ 4%] Built target mimalloc_ep Scanning dependencies of target aws_c_common_ep [ 4%] Creating directories for 'aws_c_common_ep' [ 4%] Performing download step (download, verify and extract) for 'aws_c_common_ep' -- aws_c_common_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_common_ep-prefix/src/aws_c_common_ep-stamp/aws_c_common_ep-download-.log [ 4%] No patch step for 'aws_c_common_ep' [ 5%] No update step for 'aws_c_common_ep' [ 5%] Performing configure step for 'aws_c_common_ep' -- jemalloc_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-configure-.log [ 5%] Performing build step for 'jemalloc_ep' -- aws_c_common_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_common_ep-prefix/src/aws_c_common_ep-stamp/aws_c_common_ep-configure-.log [ 5%] Performing build step for 'aws_c_common_ep' -- aws_c_common_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_common_ep-prefix/src/aws_c_common_ep-stamp/aws_c_common_ep-build-.log [ 5%] Performing install step for 'aws_c_common_ep' -- aws_c_common_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_common_ep-prefix/src/aws_c_common_ep-stamp/aws_c_common_ep-install-.log [ 6%] Completed 'aws_c_common_ep' [ 6%] Built target aws_c_common_ep Scanning dependencies of target zlib_ep [ 6%] Creating directories for 'zlib_ep' [ 7%] Performing download step (download, verify and extract) for 'zlib_ep' -- zlib_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-download-.log [ 7%] No patch step for 'zlib_ep' [ 7%] No update step for 'zlib_ep' [ 7%] Performing configure step for 'zlib_ep' -- zlib_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-configure-.log [ 8%] Performing build step for 'zlib_ep' -- zlib_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-build-.log [ 8%] Performing install step for 'zlib_ep' -- zlib_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zlib_ep-prefix/src/zlib_ep-stamp/zlib_ep-install-.log [ 8%] Completed 'zlib_ep' [ 8%] Built target zlib_ep Scanning dependencies of target brotli_ep [ 9%] Creating directories for 'brotli_ep' [ 9%] Performing download step (download, verify and extract) for 'brotli_ep' -- brotli_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-download-.log [ 9%] No patch step for 'brotli_ep' [ 9%] No update step for 'brotli_ep' [ 10%] Performing configure step for 'brotli_ep' -- brotli_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-configure-.log [ 10%] Performing build step for 'brotli_ep' -- brotli_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-build-.log [ 10%] Performing install step for 'brotli_ep' -- brotli_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/brotli_ep-prefix/src/brotli_ep-stamp/brotli_ep-install-.log [ 10%] Completed 'brotli_ep' [ 10%] Built target brotli_ep Scanning dependencies of target snappy_ep [ 11%] Creating directories for 'snappy_ep' [ 11%] Performing download step (download, verify and extract) for 'snappy_ep' -- snappy_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-download-.log [ 11%] No patch step for 'snappy_ep' [ 11%] No update step for 'snappy_ep' [ 12%] Performing configure step for 'snappy_ep' -- snappy_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-configure-.log [ 12%] Performing build step for 'snappy_ep' -- jemalloc_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-build-.log [ 12%] Performing install step for 'jemalloc_ep' -- jemalloc_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-install-.log [ 12%] Completed 'jemalloc_ep' [ 12%] Built target jemalloc_ep Scanning dependencies of target boost_ep [ 12%] Creating directories for 'boost_ep' [ 12%] Performing download step (download, verify and extract) for 'boost_ep' -- snappy_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-build-.log [ 12%] Performing install step for 'snappy_ep' -- snappy_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-install-.log [ 12%] Completed 'snappy_ep' [ 12%] Built target snappy_ep Scanning dependencies of target zstd_ep [ 12%] Creating directories for 'zstd_ep' [ 13%] Performing download step (download, verify and extract) for 'zstd_ep' -- zstd_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-download-.log [ 13%] No patch step for 'zstd_ep' [ 13%] No update step for 'zstd_ep' [ 13%] Performing configure step for 'zstd_ep' -- boost_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/boost_ep-prefix/src/boost_ep-stamp/boost_ep-download-.log [ 14%] No patch step for 'boost_ep' [ 14%] No update step for 'boost_ep' [ 14%] No configure step for 'boost_ep' [ 14%] No build step for 'boost_ep' [ 15%] No install step for 'boost_ep' [ 15%] Completed 'boost_ep' [ 15%] Built target boost_ep Scanning dependencies of target xsimd_ep [ 15%] Creating directories for 'xsimd_ep' [ 16%] Performing download step (download, verify and extract) for 'xsimd_ep' -- xsimd_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/xsimd_ep-stamp/xsimd_ep-download-.log [ 16%] No patch step for 'xsimd_ep' [ 16%] No update step for 'xsimd_ep' [ 16%] Performing configure step for 'xsimd_ep' -- zstd_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-configure-.log [ 17%] Performing build step for 'zstd_ep' -- xsimd_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/xsimd_ep-stamp/xsimd_ep-configure-.log [ 18%] Performing build step for 'xsimd_ep' -- xsimd_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/xsimd_ep-stamp/xsimd_ep-build-.log [ 18%] Performing install step for 'xsimd_ep' -- xsimd_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/xsimd_ep-stamp/xsimd_ep-install-.log [ 18%] Completed 'xsimd_ep' [ 18%] Built target xsimd_ep Scanning dependencies of target lz4_ep [ 19%] Creating directories for 'lz4_ep' [ 19%] Performing download step (download, verify and extract) for 'lz4_ep' -- lz4_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-download-.log [ 19%] No patch step for 'lz4_ep' [ 19%] Performing update step for 'lz4_ep' [ 19%] No configure step for 'lz4_ep' [ 20%] Performing build step for 'lz4_ep' -- lz4_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-build-.log [ 20%] No install step for 'lz4_ep' [ 20%] Completed 'lz4_ep' [ 20%] Built target lz4_ep Scanning dependencies of target bzip2_ep [ 21%] Creating directories for 'bzip2_ep' [ 21%] Performing download step (download, verify and extract) for 'bzip2_ep' -- bzip2_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-download-.log [ 21%] No patch step for 'bzip2_ep' [ 21%] No update step for 'bzip2_ep' [ 22%] No configure step for 'bzip2_ep' [ 22%] Performing build step for 'bzip2_ep' -- bzip2_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-build-.log [ 22%] Performing install step for 'bzip2_ep' -- bzip2_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/bzip2_ep-prefix/src/bzip2_ep-stamp/bzip2_ep-install-.log [ 22%] Completed 'bzip2_ep' [ 22%] Built target bzip2_ep Scanning dependencies of target re2_ep [ 23%] Creating directories for 're2_ep' [ 23%] Performing download step (download, verify and extract) for 're2_ep' -- re2_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/re2_ep-prefix/src/re2_ep-stamp/re2_ep-download-.log [ 23%] No patch step for 're2_ep' [ 23%] No update step for 're2_ep' [ 24%] Performing configure step for 're2_ep' -- re2_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/re2_ep-prefix/src/re2_ep-stamp/re2_ep-configure-.log [ 24%] Performing build step for 're2_ep' -- zstd_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-build-.log [ 24%] Performing install step for 'zstd_ep' -- zstd_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/zstd_ep-prefix/src/zstd_ep-stamp/zstd_ep-install-.log [ 24%] Completed 'zstd_ep' [ 24%] Built target zstd_ep Scanning dependencies of target rapidjson_ep [ 24%] Creating directories for 'rapidjson_ep' [ 24%] Performing download step (download, verify and extract) for 'rapidjson_ep' -- rapidjson_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/rapidjson_ep-stamp/rapidjson_ep-download-.log [ 25%] No patch step for 'rapidjson_ep' [ 25%] No update step for 'rapidjson_ep' [ 25%] Performing configure step for 'rapidjson_ep' -- rapidjson_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/rapidjson_ep-stamp/rapidjson_ep-configure-.log [ 25%] Performing build step for 'rapidjson_ep' -- rapidjson_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/rapidjson_ep-stamp/rapidjson_ep-build-.log [ 26%] Performing install step for 'rapidjson_ep' -- rapidjson_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/src/rapidjson_ep-stamp/rapidjson_ep-install-.log [ 26%] Completed 'rapidjson_ep' [ 26%] Built target rapidjson_ep Scanning dependencies of target utf8proc_ep [ 27%] Creating directories for 'utf8proc_ep' [ 27%] Performing download step (download, verify and extract) for 'utf8proc_ep' -- utf8proc_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-download-.log [ 27%] No patch step for 'utf8proc_ep' [ 27%] No update step for 'utf8proc_ep' [ 27%] Performing configure step for 'utf8proc_ep' -- utf8proc_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-configure-.log [ 28%] Performing build step for 'utf8proc_ep' -- utf8proc_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-build-.log [ 28%] Performing install step for 'utf8proc_ep' -- utf8proc_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-install-.log [ 28%] Completed 'utf8proc_ep' [ 28%] Built target utf8proc_ep Scanning dependencies of target aws_checksums_ep [ 28%] Creating directories for 'aws_checksums_ep' [ 28%] Performing download step (download, verify and extract) for 'aws_checksums_ep' -- aws_checksums_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_checksums_ep-prefix/src/aws_checksums_ep-stamp/aws_checksums_ep-download-.log [ 29%] No patch step for 'aws_checksums_ep' [ 29%] No update step for 'aws_checksums_ep' [ 29%] Performing configure step for 'aws_checksums_ep' -- aws_checksums_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_checksums_ep-prefix/src/aws_checksums_ep-stamp/aws_checksums_ep-configure-.log [ 29%] Performing build step for 'aws_checksums_ep' -- aws_checksums_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_checksums_ep-prefix/src/aws_checksums_ep-stamp/aws_checksums_ep-build-.log [ 30%] Performing install step for 'aws_checksums_ep' -- aws_checksums_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_checksums_ep-prefix/src/aws_checksums_ep-stamp/aws_checksums_ep-install-.log [ 30%] Completed 'aws_checksums_ep' [ 30%] Built target aws_checksums_ep Scanning dependencies of target thrift_ep [ 31%] Creating directories for 'thrift_ep' [ 31%] Performing download step (download, verify and extract) for 'thrift_ep' -- thrift_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-download-.log [ 31%] No patch step for 'thrift_ep' [ 31%] No update step for 'thrift_ep' [ 32%] Performing configure step for 'thrift_ep' -- thrift_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-configure-.log [ 32%] Performing build step for 'thrift_ep' -- re2_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-.log [ 32%] Performing install step for 're2_ep' -- re2_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/re2_ep-prefix/src/re2_ep-stamp/re2_ep-install-.log [ 32%] Completed 're2_ep' [ 32%] Built target re2_ep Scanning dependencies of target aws_c_event_stream_ep [ 32%] Creating directories for 'aws_c_event_stream_ep' [ 32%] Performing download step (download, verify and extract) for 'aws_c_event_stream_ep' -- aws_c_event_stream_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_event_stream_ep-prefix/src/aws_c_event_stream_ep-stamp/aws_c_event_stream_ep-download-.log [ 32%] No patch step for 'aws_c_event_stream_ep' [ 33%] No update step for 'aws_c_event_stream_ep' [ 33%] Performing configure step for 'aws_c_event_stream_ep' -- thrift_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build-.log [ 33%] Performing install step for 'thrift_ep' -- thrift_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-install-.log [ 33%] Completed 'thrift_ep' [ 33%] Built target thrift_ep -- aws_c_event_stream_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_event_stream_ep-prefix/src/aws_c_event_stream_ep-stamp/aws_c_event_stream_ep-configure-.log [ 33%] Performing build step for 'aws_c_event_stream_ep' -- aws_c_event_stream_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_event_stream_ep-prefix/src/aws_c_event_stream_ep-stamp/aws_c_event_stream_ep-build-.log [ 33%] Performing install step for 'aws_c_event_stream_ep' -- aws_c_event_stream_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/aws_c_event_stream_ep-prefix/src/aws_c_event_stream_ep-stamp/aws_c_event_stream_ep-install-.log [ 34%] Completed 'aws_c_event_stream_ep' [ 34%] Built target aws_c_event_stream_ep Scanning dependencies of target awssdk_ep [ 34%] Creating directories for 'awssdk_ep' [ 34%] Performing download step (download, verify and extract) for 'awssdk_ep' -- awssdk_ep download command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/awssdk_ep-prefix/src/awssdk_ep-stamp/awssdk_ep-download-.log [ 34%] No update step for 'awssdk_ep' [ 35%] No patch step for 'awssdk_ep' [ 35%] Performing configure step for 'awssdk_ep' -- awssdk_ep configure command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/awssdk_ep-prefix/src/awssdk_ep-stamp/awssdk_ep-configure-.log [ 35%] Performing build step for 'awssdk_ep' -- awssdk_ep build command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/awssdk_ep-prefix/src/awssdk_ep-stamp/awssdk_ep-build-.log [ 36%] Performing install step for 'awssdk_ep' -- awssdk_ep install command succeeded. See also /tmp/RtmpRLVXZh/file20721bb0e480/awssdk_ep-prefix/src/awssdk_ep-stamp/awssdk_ep-install-*.log [ 36%] Completed 'awssdk_ep' [ 36%] Built target awssdk_ep Scanning dependencies of target toolchain Scanning dependencies of target arrow_bundled_dependencies [ 36%] Built target toolchain [ 36%] Bundling /tmp/RtmpRLVXZh/file20721bb0e480/release/libarrow_bundled_dependencies.a Scanning dependencies of target arrow_dependencies [ 36%] Built target arrow_dependencies Scanning dependencies of target arrow_dataset_objlib [ 36%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/dataset.cc.o [ 36%] Built target arrow_bundled_dependencies [ 36%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/dataset_writer.cc.o Scanning dependencies of target arrow_objlib [ 36%] Building CXX object src/arrow/dataset/CMakeFiles/arrow_dataset_objlib.dir/discovery.cc.o [ 36%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_base.cc.o [ 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/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include/parquet/encryption/kms_client_factory.h -- Installing: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include/parquet/encryption/local_wrap_kms_client.h -- Installing: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include/parquet/encryption/test_encryption_util.h -- Installing: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include/parquet/encryption/test_in_memory_kms.h -- Installing: /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include/parquet/encryption/two_level_cache_with_expiration.h

• popd /tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow PKG_CFLAGS=-I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON PKG_LIBS=-L/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/lib -larrow_dataset -lparquet -larrow -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet -lssl -lcrypto -lcurl ** libs g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RTasks.cpp -o RTasks.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altrep.cpp -o altrep.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c array.cpp -o array.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c array_to_vector.cpp -o array_to_vector.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arraydata.cpp -o arraydata.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arrowExports.cpp -o arrowExports.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bridge.cpp -o bridge.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c buffer.cpp -o buffer.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c chunkedarray.cpp -o chunkedarray.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compression.cpp -o compression.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compute-exec.cpp -o compute-exec.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compute.cpp -o compute.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c config.cpp -o config.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c csv.cpp -o csv.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dataset.cpp -o dataset.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c datatype.cpp -o datatype.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c expression.cpp -o expression.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c feather.cpp -o feather.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c field.cpp -o field.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c filesystem.cpp -o filesystem.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c imports.cpp -o imports.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c io.cpp -o io.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c json.cpp -o json.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c memorypool.cpp -o memorypool.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c message.cpp -o message.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c parquet.cpp -o parquet.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c r_to_arrow.cpp -o r_to_arrow.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c recordbatch.cpp -o recordbatch.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c recordbatchreader.cpp -o recordbatchreader.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c recordbatchwriter.cpp -o recordbatchwriter.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c scalar.cpp -o scalar.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c schema.cpp -o schema.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c symbols.cpp -o symbols.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c table.cpp -o table.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c threadpool.cpp -o threadpool.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/include -DARROW_R_WITH_ARROW -DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_S3 -DARROW_R_WITH_JSON -I'/databricks/spark/R/lib/cpp11/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-QwogzP/r-base-4.1.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type_infer.cpp -o type_infer.o g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o arrow.so RTasks.o altrep.o array.o array_to_vector.o arraydata.o arrowExports.o bridge.o buffer.o chunkedarray.o compression.o compute-exec.o compute.o config.o csv.o dataset.o datatype.o expression.o feather.o field.o filesystem.o imports.o io.o json.o memorypool.o message.o parquet.o r_to_arrow.o recordbatch.o recordbatchreader.o recordbatchwriter.o scalar.o schema.o symbols.o table.o threadpool.o type_infer.o -L/tmp/RtmphLsRtL/R.INSTALL205114eb9ae3/arrow/libarrow/arrow-7.0.0/lib -larrow_dataset -lparquet -larrow -larrow -larrow_bundled_dependencies -larrow_dataset -lparquet -lssl -lcrypto -lcurl -L/usr/lib/R/lib -lR installing to /local_disk0/.ephemeral_nfs/envs/rEnv-2e07b476-7186-45f2-b1ed-9eba706c1848/00LOCK-arrow/00new/arrow/libs R inst byte-compile and prepare package for lazy loading help * installing help indices building package indices installing vignettes testing if installed package can be loaded from temporary location checking absolute paths in shared objects and dynamic libraries testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path
• DONE (arrow) randomForest 4.6-14 Type rfNews() to see new features/changes/bug fixes.

Attaching package: ‘SparkR’

The following object is masked by ‘.GlobalEnv’:

setLocalProperty

The following objects are masked from ‘package:plyr’:

arrange, count, desc, join, mutate, rename, summarize, take

The following objects are masked from ‘package:data.table’:

between, cube, first, hour, last, like, minute, month, quarter,
rollup, second, tables, year

The following objects are masked from ‘package:stats’:

cov, filter, lag, na.omit, predict, sd, var, window

The following objects are masked from ‘package:base’:

as.data.frame, colnames, colnames<-, drop, endsWith, intersect,
rank, rbind, sample, startsWith, subset, summary, transform, union

[1] "installing arrow" Installing package into ‘/local_disk0/.ephemeral_nfs/envs/rEnv-2e07b476-7186-45f2-b1ed-9eba706c1848’ (as ‘lib’ is unspecified) trying URL 'https://packagemanager.rstudio.com/all/__linux__/focal/latest/src/contrib/arrow_7.0.0.tar.gz' Content type 'binary/octet-stream' length 4572465 bytes (4.4 MB)

downloaded 4.4 MB

The downloaded source packages are in ‘/tmp/Rtmpt8TzRB/downloaded_packages’

Attaching package: ‘arrow’

The following objects are masked from ‘package:SparkR’:

contains, schema, struct

The following object is masked from ‘package:utils’:

timestamp`

[eitsupi]

@james-camacho-ab Please read my post above, you cannot install a binary package without setting the UserAgent.

[james-camacho-ab]

@eitsupi Just to make sure I'm doing this right, am I just adding this line of code to an Rprofile.site file? We don't currently have that, so would I need to create that file in my branch and then reference that file in the init script of the Databricks cluster?

# Set default user agent options(HTTPUserAgent = sprintf("R/%s R (%s)", getRversion(), paste(getRversion(), R.version["platform"], R.version["arch"], R.version["os"])))

[eitsupi]

If configured correctly, a binary installation will be performed instead of a source installation.

[james-camacho-ab]

@eitsupi @wjones127 Here's where I'm at as of today:

• Clusters are no longer able to install arrow via CRAN; the error provided is pretty vague and indicates reaching out to DBX Support, which I have but haven't heard back yet
• I've tried adding the init script from this site, but the cluster gives a "non-zero value returned" error when trying to run it
• I can put that script at the top of my notebook before the library installation, but the installation is taking ~17 minutes to complete. Here's some relevant logs from that installation:

• installing source package ‘arrow’ ... package ‘arrow’ successfully unpacked and MD5 sums checked using staged installation **** pkg-config not installed, setting ARROW_DEPENDENCY_SOURCE=BUNDLED trying URL 'https://github.com' downloaded 203 KB

Using ubuntu-18.04 binary for ubuntu-20.04 trying URL 'https://arrow-r-nightly.s3.amazonaws.com/libarrow/bin/ubuntu-18.04/arrow-7.0.0.zip' Error in download.file(from_url, to_file, quiet = quietly) : cannot open URL 'https://arrow-r-nightly.s3.amazonaws.com/libarrow/bin/ubuntu-18.04/arrow-7.0.0.zip' No libarrow binary found for version 7.0.0 on ubuntu-18.04 Found local C++ source: 'tools/cpp' Building libarrow from source For a faster, more complete installation, set the environment variable NOT_CRAN=true before installing See install vignette for details: https://cran.r-project.org/web/packages/arrow/vignettes/install.html

Note that NOT_CRAN = TRUE is set as an environment variable within the cluster, so not sure why that warning is popping up. Happy to try any other ideas or hop on a Zoom / Teams call to screen share and work through it

[eitsupi]

Happy to try any other ideas

You can try these approaches https://arrow.apache.org/docs/r/articles/install.html

[assignUser]

@james-camacho-ab where you able to solve your install issue?

[james-camacho-ab]

@assignUser Closing, not relevant for our team anymore since we no longer are using R. Seemed like it was a cluster policy issue