problem with python script

[robeach78]

I am running hichipper for the first time and I run into this error:

Traceback (most recent call last): File "/users/mbeato/rferrari/.local/bin/hichipper", line 11, in load_entry_point('hichipper==0.7.9', 'console_scripts', 'hichipper')() File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 489, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 2852, in load_entry_point return ep.load() File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 2443, in load return self.resolve() File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 2449, in resolve module = import(self.module_name, fromlist=['name'], level=0) File "/users/mbeato/rferrari/.local/lib/python3.8/site-packages/hichipper-0.7.9-py3.8.egg/hichipper/cli.py", line 136 if make_ucsc or make_washu: ^ TabError: inconsistent use of tabs and spaces in indentation

what is this about?

Thanks a lot in advance.

R

[caleblareau]

Hi,

The tool was originally written with only python 2 support— that to me seems like the first thing to change (looks like you’re using python 3)

On Mar 18, 2021, at 2:20 PM, robeach78 @.**@.>> wrote:

I am running hichipper for the first time and I run into this error:

Traceback (most recent call last): File "/users/mbeato/rferrari/.local/bin/hichipper", line 11, in load_entry_point('hichipper==0.7.9', 'console_scripts', 'hichipper')() File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 489, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 2852, in load_entry_point return ep.load() File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 2443, in load return self.resolve() File "/software/as/el7.2/EasyBuild/CRG/software/Python/3.8.2-GCCcore-9.3.0/lib/python3.8/site-packages/pkg_resources/init.py", line 2449, in resolve module = import(self.module_name, fromlist=['name'], level=0) File "/users/mbeato/rferrari/.local/lib/python3.8/site-packages/hichipper-0.7.9-py3.8.egg/hichipper/cli.py", line 136 if make_ucsc or make_washu: ^ TabError: inconsistent use of tabs and spaces in indentation

what is this about?

Thanks a lot in advance.

R

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[yanchunzhang]

HI, I also got the same issue. I tried install to a python2 version but the MACS2 package will failed installation. While I installed it successfully under python3, then this error happen. What should I do to solve this?

Thanks, Yanchun

[ntukirafang]

I also have the same issue. Did anyone know how to install MACS2 under python3(such as Python 2.7)? After installing MACS2, pip install hichipper can be solved. In my case, I installed the MACS2.1.4 version(suitable for Python 2.7) and double check Cython version is 0.27.2. Then, with python2.7 setup.py again, you will successfully install hichipper package.