In the case of a malformed path in the gfa, specifically a segment missing its orientation, BandageNG will just instantly crash and exit (at least on macos).
This graph is able to reproduce the behaviour (or the path segment 1,2+). Changing to the valid 1+,2+ will load the graph successfully)
S 1 TAG
S 2 CAT
L 1 + 2 + 0M
P foo 1+,2 0M
It seems like oriented_segment in io/gfa.cpp should handle invalid input and complain later, but this just crashes.
In the case of a malformed path in the gfa, specifically a segment missing its orientation, BandageNG will just instantly crash and exit (at least on macos).
This graph is able to reproduce the behaviour (or the path segment
1,2+). Changing to the valid1+,2+will load the graph successfully)It seems like oriented_segment in io/gfa.cpp should handle invalid input and complain later, but this just crashes.
Best, Alex