b2slab FELLA issues - Githubissues

b2slab / FELLA

FELLA: an R package for Metabolomics data enrichment through diffusion

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issues

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Shiny App Issues

#25 infinity-a11y opened 1 year ago
0
How to disable module, enzyme, and gene names in the network?

#24 YonghuiDong opened 1 year ago
2
buildGraphFromKEGGREST can't work

#23 wuzeming closed 1 year ago
3
Expand pathway databases

#22 DeniseSl22 closed 2 years ago
1
diffusion enrichment with custom background metabolite set.

#21 RolandTengolics closed 2 years ago
3
I do not get all "hsa" compounds from KEGG

#20 Francisco-madrid-gambin closed 2 years ago
3
how to correct for multiple testing with p.scores using diffusion method

#19 mingwhy closed 2 years ago
1
Let user decide level of filtering

#18 SergiPicart opened 3 years ago
0
Error in double(n.nodes) : object 'n.nodes' not found - when running pagerank

#17 SergiPicart opened 3 years ago
0
Multiplicity correction for pathway enrichment not working in enrich function for hypergeometric analysis

#16 billy-s-lab closed 1 year ago
1
HTTP 404 error

#15 MSCTR closed 4 years ago
2
Convenient function to retrieve compounds belonging to a pathway

#14 SergiPicart opened 4 years ago
3
getBackground() should give all the compounds if no background was specified

#13 SergiPicart opened 4 years ago
0
Export GO term similarity tables

#12 SergiPicart opened 4 years ago
0
plotGRaph option for labels

#11 kunstner opened 4 years ago
1
GO labels crash in the shiny app

#10 SergiPicart opened 4 years ago
0
Some organisms still give 404 after KEGG REST API update

#9 SergiPicart closed 4 years ago
1
KEGGREST 404 on KEGG modules

#8 SergiPicart closed 4 years ago
1
Knowledge graph filtering options

#7 SergiPicart opened 5 years ago
0
Interactive plots in console mode

#6 SergiPicart opened 5 years ago
0
UNIPROT ids

#5 SergiPicart opened 5 years ago
0
Intermediate table format

#4 SergiPicart opened 6 years ago
0
Generate database from the shiny app

#3 SergiPicart opened 6 years ago
0
Add DT in suggests

#2 SergiPicart closed 6 years ago
0
Table error with shiny app and hypergeom test

#1 SergiPicart opened 6 years ago
0