Improved method of applying negative controls to the ROI and Non-ROI masks with indexing rather than loops.
Updated test functions and pipeline to correspond with these changes.
For future, could update the input for readii command line call to separate ROI and negative control type
Improved method of applying negative controls to the ROI and Non-ROI masks with indexing rather than loops. Updated test functions and pipeline to correspond with these changes.
For future, could update the input for readii command line call to separate ROI and negative control type