feat: improve logging + make verbose

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Files with missing lines	Patch %	Lines
src/readii/pipeline.py	0.00%	51 Missing :warning:
src/readii/utils/logging_config.py	71.05%	22 Missing :warning:
src/readii/metadata.py	64.70%	18 Missing :warning:
src/readii/loaders.py	60.00%	10 Missing :warning:
src/readii/feature_extraction.py	61.90%	8 Missing :warning:

bhklab / readii

feat: improve logging + make verbose #59

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