New `@id` generation for parsers and other bug corrections - Githubissues

bids-standard / BEP028_BIDSprov

Organizing and coordinating BIDS extension proposal 28 : BIDS Provenance

https://bids.neuroimaging.io/bep028

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New `@id` generation for parsers and other bug corrections #142

Open bclenet opened 1 month ago

bclenet commented 1 month ago

This PR addresses the following topics:

Closes #137, closes #138 about RRIDs of Software records
new strategies for @id generation :
- for Agents, @id is set to the value of Label + a random alphanumeric string
- for Activities, @id is set to the value of Label + a random alphanumeric string
- for Entities, @id is set using the value of AtLocation to generate a bids: id. It is set to an uuri if AtLocation is not set or not suitable for an urn value
- launcher for nidm examples makes BIDS compliant paths for files that are part of BIDS dataset, or derivatives
- correction of some function descriptions for AFNI and FSL
- some other unreferenced bugs for all parsers

cmaumet commented 1 month ago

Discussed with @bclenet, this is ready to review