would it be hard to add k<31 support for .ctx files?

bingmann / cobs

COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)

https://panthema.net/cobs

MIT License

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Closed iqbal-lab closed 4 years ago

iqbal-lab commented 4 years ago

I know @graceblackwell is interested in k=19

bingmann commented 4 years ago

Okay, should not be a problem. Could you please send me a small (few KiB) .ctx with k=19, which I can include in the tests.

bingmann commented 4 years ago

done. soon in master branch.

iqbal-lab commented 4 years ago

Just back from holiday! i assume some small datasets still useful?

bingmann commented 4 years ago

naw. all done. made some myself.