Segmentation fault when running pre-compiled binaries

[maiumy]

Hello! I am running into Segmentation fault error while running Satsuma2 and I'd like some help to solve this. I've run the analysis using the pre-compiled binaries, according to what I saw recommended here, but I am still getting the error Segmentation fault (core dumped).

This is what I got:

ERROR!!! Match with Length==0 collected (resultsv[4427])
query_id=2048001
target_id=2048001
query_size=2046
qstart=139995943279104
tstart=4607182418800017408
len=4607182418800017408
reverse=178
prob=2.14424e-321
ident=1.3497e-317
ERROR!!! Match with Length==0 collected (resultsv[4429])
query_id=2049025
target_id=2049025
query_size=3071
qstart=139995943279104
tstart=4607182418800017408
len=4607182418800017408
reverse=112
prob=5.53354e-322
ident=8.39707e-318
WORKQUEUE: matches collected. FW: 3136   REV: 1294
MAIN: 4430 new matches collected
MAIN: Running the chaining step...
Matches before collapse: 1142142
Matches after collapse:  1141329
MAIN: running coverage tracker
MAIN: coverage tracker: +131131856445 -1432
MAIN: DynProg...
Chaining (inline)...
Filling out repeat lists...
Segmentation fault (core dumped)

Also, the satsuma.log file generated is empty. Is that normal? Thanks.

[NathanKenny]

Apologies - I am getting exactly the same seg fault error with the test files, using either the precompiled binaries or after installing from source. If I can provide any other information for diagnosis, please let me know!

Nathan Kenny

: prob=0 big ones: 0
MAIN: Targets retrieved: 0
MAIN: STATUS: iteration, slaves_processed, new_matches, slave_to_match_relation, targets_needed, targets_collected
1
: ident=0.581395
MAIN: STATUS: 86298, 0, 0, 0, 672803, 0, 2022/03/01 20:51:49
MAIN: starting iteration 86299
WORKQUEUE: matches collected. FW: 7   REV: 8
MAIN: 15 new matches collected
MAIN: Running the chaining step...
Matches before collapse: 1144
Matches after collapse:  1143
MAIN: running coverage tracker
MAIN: coverage tracker: +347614757 -978
MAIN: DynProg...
Chaining (inline)...
Filling out repeat lists...
Segmentation fault (core dumped)

[gargkritika]

Hi Did you find a solution for this issue?

Thank you Best regards Kritika

[NathanKenny]

Nope, I never heard or found anything sorry!

On Tue, Aug 16, 2022 at 3:31 AM gargkritika @.***> wrote:

Hi Did you find a solution for this issue?

Thank you Best regards Kritika

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