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biomodhub / biomod2

BIOMOD is a computer platform for ensemble forecasting of species distributions, enabling the treatment of a range of methodological uncertainties in models and the examination of species-environment relationships.
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BIOMOD_EnsembleForecasting: No output raster file writes in the harddisk #504

Open Mountain-Horn opened 1 month ago

Mountain-Horn commented 1 month ago

My code run successfully while I am doing the ensemble modelling projection using BIOMOD_EnsembleForecasting, but after successfully running no ensemble raster file write in my hard disk. Can you please suggest me any suggestion?

current projections # Project single models

capra_models_proj_current <- BIOMOD_Projection( bm.mod = myBiomodModelOut, new.env = capra_variables_for_current, proj.name = "current", binary.meth = "TSS", models.chosen = 'all', output.format = ".grd", do.stack = FALSE )

capra_ensemble_models_proj <-

  • BIOMOD_EnsembleForecasting(
  • bm.mod = myBiomodModelOut,
  • bm.em = myBiomodEM,
  • bm.proj = ibex_models_proj_current,
  • proj.name = "current",
  • binary.meth = "TSS",
  • output.format = ".grd",
  • )

-=-=-=-=-=-=-=-=-=-= Do Ensemble Models Projection -=-=-=-=-=-=-=-=-=-=

Creating suitable Workdir...

> Projecting capra_EMmeanByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...
> Projecting capra_EMcvByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...
> Projecting capra_EMmedianByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...
> Projecting capra_EMcaByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...
> Projecting capra_EMwmeanByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...
> Projecting capra_EMciInfByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...
> Projecting capra_EMciSupByTSS_mergedData_mergedRun_mergedAlgo ...
    Writing projection on hard drive...

-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= Done -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=

─ Session info ──────────────────────────────────────────────────── setting value version R version 4.3.0 (2023-04-21 ucrt) os Windows 10 x64 (build 19045) system x86_64, mingw32 ui RStudio language (EN) collate English_United States.utf8 ctype English_United States.utf8 tz Asia/Calcutta date 2024-09-13 rstudio 2024.04.2+764 Chocolate Cosmos (desktop) pandoc NA

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HeleneBlt commented 1 month ago

Hi !

Thanks for reporting ! 🙏

I need a little more information. Can you tell me what is in your capra/proj_current/indiviual_projections folder. Do you have the grd files for the single models ? Do you not have any of your ensemble models files or are only some of them missing? Is it completely empty?

Thanks, Hélène