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bioperl / bioperl-live

Core BioPerl 1.x code
http://bioperl.org
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problem with installing Bio::DB::Fasta module #360

Open shaghayeghsoudi opened 3 years ago

shaghayeghsoudi commented 3 years ago

Hello, I have trying for several days to install Bio::DB::Fasta module on my conda enviornment. I t should be straightforward to install but I keep getting this error message Can't locate Bio/DB/Fasta.pm in @INC (you may need to install the Bio::DB::Fasta module)

I gave tried different ways even forced to install but all failed. I appreciate of you could help me to fix this issue to continue with my analysis.

yzhernand commented 3 years ago

I'm over a month late to the party, but how did you install it?

shaghayeghsoudi commented 3 years ago

Unfortunately, No. I could not. I switched to TrackSigFreq. But would like to know if there is any solution to fix that bioperl installation. That was pain which eventually did don't work

hyphaltip commented 3 years ago

what conda pkg did you install? perl-bioperl-core and perl-bioperl ?

Jason Stajich @hyphaltip http://lab.stajich.org

On Fri, Aug 6, 2021 at 7:04 PM Shaghayegh Soudi @.***> wrote:

Unfortunately, No. I could not. I switched to TrackSigFreq. But would like to know if there is any solution to fix that bioperl installation. That was pain which eventually did don't work

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