Codontable bugs. - Githubissues

bioperl / bioperl-live

Core BioPerl 1.x code

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Codontable bugs. #386

Closed Juke34 closed 7 months ago

Juke34 commented 9 months ago

Fix bugs in codon table:

table 0 was not selectable via Bio::Tools::CodonTable->new( -id => 0); but was working only by creating a codon table by default and using the id function to set the table to 0
table 7-8 and 17-20 was selectable while have been removed
Negative value was usable value while it should not

carandraug commented 7 months ago

Thank you for report and patches. I've edited them and merged. One of the changes (testing that removed tables such as id=7 was the string "''") was not needed because instead of that check the internal tables now have a real empty string. Closing as merged (with edits).