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biosustain / cameo

cameo - computer aided metabolic engineering & optimization
http://cameo.bio
Apache License 2.0
114 stars 44 forks source link

Fix copbrapy f and x_dict deprecation #221

Closed phantomas1234 closed 5 years ago

phantomas1234 commented 5 years ago

This should make cameo compatible again with the latest cobrapy release.

codecov-io commented 5 years ago

Codecov Report

:exclamation: No coverage uploaded for pull request base (devel@e994d07). Click here to learn what that means. The diff coverage is 60%.

Impacted file tree graph

@@           Coverage Diff            @@
##             devel     #221   +/-   ##
========================================
  Coverage         ?   63.97%           
========================================
  Files            ?       56           
  Lines            ?     5108           
  Branches         ?      882           
========================================
  Hits             ?     3268           
  Misses           ?     1656           
  Partials         ?      184
Impacted Files Coverage Δ
cameo/flux_analysis/simulation.py 68.84% <ø> (ø)
.../strain_design/deterministic/linear_programming.py 22.74% <0%> (ø)
cameo/flux_analysis/util.py 88.88% <100%> (ø)
cameo/flux_analysis/analysis.py 70.21% <100%> (ø)

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