AttributeError when importing cameo.flux_analysis.phenotypic_phase_plane

biosustain / cameo

cameo - computer aided metabolic engineering & optimization

http://cameo.bio

Apache License 2.0

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Closed djinnome closed 5 years ago

djinnome commented 5 years ago

Hi folks,

When I try to do the following:

from cameo.flux_analysis import phenotypic_phase_plane

I get the following error:

AttributeError: module 'pandas.io.formats.console' has no attribute 'in_ipython_frontend'

Update: The problem seemed to be that I installed pandas==0.21.0 as per the instructions on the DTU Biosustain cell factory design course setup

I have updated the AgileBioFoundry cell-factory-design-course conda environment.yml to install a later version of pandas.

phantomas1234 commented 5 years ago

Funny, just stumbled over the same problem with a student yesterday. I'll update the course materials.