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bm2-lab / ASNEO

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Some error when i am running test #1

Open xiaoguang-sjtu opened 3 years ago

xiaoguang-sjtu commented 3 years ago

2021-05-11 20:25:33,653 [INFO]: Call netMHCpan 2021-05-11 20:25:56,931 [INFO]: Begin Neoantign Score Process ... 2021-05-11 20:25:57,004 [INFO]: Epit number is: 130 2021-05-11 20:26:02,848 [WARNING]: Some error when process IGYPITLYV score, retry! error: [20:26:02] ../src/learner.cc:956: Check failed: header == serialisationheader:

If you are loading a serialized model (like pickle in Python) generated by older XGBoost, please export the model by calling Booster.save_model from that version first, then load it back in current version. There's a simple script for helping the process. See:

https://xgboost.readthedocs.io/en/latest/tutorials/saving_model.html

for reference to the script, and more details about differences between saving model and serializing.

raerose01 commented 3 years ago

Hi, I get this same error when running the test script. Is it clear what is causing this? Thanks!

raerose01 commented 3 years ago

Hi @xiaoguang-sjtu , I did find that if I changed the version of the python packages I was using, I could get the ASNEO test to run. Ended up specifying the following:

scikit-learn==0.22.0
xgboost==0.90
xiaoguang-sjtu commented 3 years ago

Hi @xiaoguang-sjtu , I did find that if I changed the version of the python packages I was using, I could get the ASNEO test to run. Ended up specifying the following:

scikit-learn==0.22.0
xgboost==0.90

Hi @raerose01 , thanks for your reply. According to your suggest, it is working, but the output is empty. Do you get the result you want？