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bowang-lab / scGPT

https://scgpt.readthedocs.io/en/latest/
MIT License
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Tutorials for In-silico Reverse Perturbation Prediction #59

Open taffy-miao opened 11 months ago

taffy-miao commented 11 months ago

Hi TEAM! Your works are marvelous and inspired me a lot. But I have faced some problems: I don't know how to repeat the Figure3:D and F result, I wonder if there's a unpublished tutorial for the In-silico-experinment? Thanks in advance!

subercui commented 11 months ago

Hi, thank you for your interest. We haven't released that one yet. Originally, we didn't plan to include that in the tutorials folder. We will make a separate notebook for it in the near future.

nathaniel-mahieu commented 10 months ago

I would like to echo appreciation for this publication/model!

And a tutorial for reverse perturbation prediction would be greatly appreciated!

lautaro450 commented 3 weeks ago

Hello, is there any update regarding the tutorial notebook for In-silico reverse perturbation prediction?.

linlull commented 6 days ago

Hello, is there any update regarding the tutorial notebook for In-silico reverse perturbation prediction?.

Yes, I found the tutorial notebook for In-silico reverse perturbation prediction in https://zenodo.org/records/10466117.