broadinstitute gistic2 issues

broadinstitute / gistic2

Genomic Identification of Significant Targets in Cancer (GISTIC), version 2

MIT License

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issues

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did not able find locus id for ref mat file

#26 Anjaligarg006 opened 3 weeks ago
0
Making a refgene.mat for a different ensembl version

#25 grantn5 opened 7 months ago
0
Compiling GISTIC2 for ARM64

#24 ppararaj opened 8 months ago
0
No usage statement in the documentation

#23 TBradley27 opened 9 months ago
0
BLAS loading error

#22 zhangyiqing0706 opened 1 year ago
0
Index exceeds matrix dimensions.

#21 zhangyiqing0706 opened 1 year ago
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Unreliable GISTIC2 results

#20 tanbiswas opened 1 year ago
0
Annotate peaks for desired genes

#19 shwetha141 opened 1 year ago
1
gistic- overlapp issue

#18 hanico888 opened 1 year ago
0
What does this error regarding marker less than smooth length and chromosome smoothing mean? What can I do to fix/bypass this error?

#17 xuexingwangzhedishitian opened 1 year ago
0
x chromosome CNV analysis

#16 MAKADDOURA opened 2 years ago
1
genes in wide peak

#15 stroke1989 closed 2 years ago
2
interpretation of gistic2 output

#14 stroke1989 closed 2 years ago
1
question about calling CNV with tumor and normal-pair sample

#13 lizhan96 closed 2 years ago
1
Error with the MCR environment

#12 lizhan96 opened 2 years ago
3
How to create customized refgene mat file

#11 ianyfchang opened 2 years ago
0
Symbol error

#10 MrDotOne opened 2 years ago
1
about Segmentation fault (core dumped) bug

#9 mugpeng opened 2 years ago
4
Add tool to bioconda

#8 FriederikeHanssen opened 2 years ago
2
how to prepare markers file when I use WES data

#7 xinmiaoyan opened 2 years ago
1
crosses chromosomes

#6 Diogopell opened 3 years ago
5
./gp_gistic2_from_seg: error while loading shared libraries: libncurses.so.5

#5 carcarre11 opened 3 years ago
2
How to get the table_amp.conf_*.txt file?

#4 hfl112 opened 3 years ago
0
Gistic2 significant genes don't locate in the corresponding cytoband

#3 qindan2008 closed 3 years ago
1
Doc update

#2 stevenschumacher closed 4 years ago
0
mouse data

#1 wangweifeng2018 opened 5 years ago
1