broadinstitute / viral-ngs

Viral genomics analysis pipelines
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travis conda debug #944

Closed tomkinsc closed 5 years ago

tomkinsc commented 5 years ago

This hopefully includes changes to allow travis builds to resume, and incorporates KrakenUniq commits from @yesimon and an update to gap2seq update @notestaff. The commit history is noisy from all of the travis iteration, so this will need to be squashed/rebased before being merged.