Open oliverdrechsel opened 1 year ago
Hello,
The database name is the name of the file created in you computer. The command line must be something like this:
$ wgmlst import B.pseudomallei.db "Burkholderia pseudomallei"
And you use this database for the rest of the pipeline in the other command.
Hope it would be clear! Benoit
Hi,
thanks. This worked prefectly fine.
By the way i think there is a small error in the documentation.
# documentation
wgMLST add --help
Usage: wgMLST add [OPTIONS] GENOME DATABASE
In reality GENOME
and DATABASE
are swapped.
# program help/usage
$ wgMLST add --help
Usage: wgMLST add [OPTIONS] DATABASE GENOME
Nice.
You right, I update documentation accordingly.
Hi,
i installed your tool employing conda. On Database import i receive a sql error
Could you help me finding the mistake i do?
cheers.