search

cBio / cbio-cluster

MSKCC cBio cluster documentation
12 stars 2 forks source link

cpath node gg06 idle #406

Closed aday00 closed 8 years ago

aday00 commented 8 years ago

gg06 runs no jobs and is completely idle. There is great urgency to use all our computational pathology nodes (queue=cpath) because we have a hard May 3 deadline for a manuscript rebuttal. I need to use gg01, gg02, gg03, gg04, gg05, and gg06 to finish the computational work in time.

If this does not work, I'd like to request that I break the rules and directly SSH to these nodes to run jobs, alerting other users.

schaumba@mskcc-ln1:~$ qstat -n grep -1 schau head -20

7120238.hal-sched1.loc schaumba cpath patho_tune.joe.b 4159 1 2 -- 47:59:00 R 00:48:03 gg02/0-1 7120239.hal-sched1.loc schaumba cpath patho_tune.joe.b 34142 1 2 -- 47:59:00 R 00:45:44 gg03/0-1 7120240.hal-sched1.loc schaumba cpath patho_tune.joe.b 52379 1 2 -- 47:59:00 R 00:44:03 gg01/0-1 7120242.hal-sched1.loc schaumba cpath patho_tune.joe.b 65435 1 2 -- 47:59:00 R 00:39:32 gg05/0-1 7120243.hal-sched1.loc schaumba cpath patho_tune.joe.b 9576 1 2 -- 47:59:00 R 00:38:24 gg04/0-1

7120244.hal-sched1.loc schaumba cpath patho_tune.joe.b -- 1 2 -- 47:59:00 Q -- -- 7120245.hal-sched1.loc schaumba cpath patho_tune.joe.b -- 1 2 -- 47:59:00 Q -- -- 7120246.hal-sched1.loc schaumba cpath patho_tune.joe.b -- 1 2 -- 47:59:00 Q -- -- 7120247.hal-sched1.loc schaumba cpath patho_tune.joe.b -- 1 2 -- 47:59:00 Q --

tatarsky commented 8 years ago

Sorry we disabled it in the queue for a moment to answer a compatibility question. Re-enabling.

tatarsky commented 8 years ago

Re-enabled.

tatarsky commented 8 years ago

You should see your jobs there now. My apologies I needed to answer a config question and did not want a job on it when I was looking at it.

aday00 commented 8 years ago

Oh fantastic, thanks for the quick reply! No worries, no harm done.

tatarsky commented 8 years ago

Yeah, it was to plan for an expansion. Sorry, I don't normally idle the nodes without notice but I literally was about to put it back when I saw your email. My timing on a Friday stinks and I apologize for the inconvenience.

aday00 commented 8 years ago

It was like 10 seconds, don't worry

tatarsky commented 8 years ago

Grin ;) Have a good Friday and good luck on your deadline.