Some reference files are unnecessary

cancerit / ascatNgs

Somatic copy number analysis using WGS paired end wholegenome sequencing

http://cancerit.github.io/ascatNgs/

GNU Affero General Public License v3.0

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Closed keiranmraine closed 8 years ago

keiranmraine commented 8 years ago

The data for -snp_loci and -snp_pos file options can all be generated on the fly from the -snp_gc file.

Update to do this internally rather than have duplication of data.