Feature/curr protocols cleanup

cancerit / ascatNgs

Somatic copy number analysis using WGS paired end wholegenome sequencing

http://cancerit.github.io/ascatNgs/

GNU Affero General Public License v3.0

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Feature/curr protocols cleanup #49

Closed keiranmraine closed 8 years ago

keiranmraine commented 8 years ago

@drjsanger , please can you review. Pat has approved the output, XX has no Y defined, XY has X/Y copynumber as1/0 for each germline segment on those chromosomes.