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cancerit
/
ascatNgs
Somatic copy number analysis using WGS paired end wholegenome sequencing
http://cancerit.github.io/ascatNgs/
GNU Affero General Public License v3.0
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Generate usable generic output when 'force' option is specified
#20
keiranmraine
closed
10 years ago
0
Sync with master
#19
keiranmraine
closed
10 years ago
0
Updated to use c implementation of alleleCounter
#18
keiranmraine
closed
10 years ago
0
Fold in the C alleleCount script
#17
keiranmraine
closed
10 years ago
1
Merge approved bugfix and prep 1.3.1
#16
keiranmraine
closed
10 years ago
0
Fixes #14 and ensures same perl version is used for external script
#15
keiranmraine
closed
10 years ago
0
CN_to_VCF.pl not being deployed
#14
keiranmraine
closed
10 years ago
0
Added copy number conversion code and relevant testData and tests
#13
ghost
closed
10 years ago
0
Need to get absolute path for outdir
#12
keiranmraine
closed
10 years ago
0
Merge prepped v1.2.3 release
#11
keiranmraine
closed
10 years ago
0
1.2 bugfix rcode
#10
keiranmraine
closed
10 years ago
0
prep v1.2.2
#9
keiranmraine
closed
10 years ago
0
Fixes #7
#8
keiranmraine
closed
10 years ago
0
chdir doesn't work before execution of runASCAT.R (as it isn't the thread being executed)
#7
keiranmraine
closed
10 years ago
0
all cmd paths need to be fully expanded
#6
keiranmraine
closed
10 years ago
1
prep v1.2.1
#5
keiranmraine
closed
10 years ago
0
Corrected error in use of module_dir
#4
keiranmraine
closed
10 years ago
0
Roll v1.2
#3
keiranmraine
closed
10 years ago
0
Add ability to attempt guess of gender, also removed some irrelevant cop...
#2
keiranmraine
closed
10 years ago
2
Prep for 1.1.0
#1
keiranmraine
closed
10 years ago
0
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