Closed susutBu closed 2 years ago
Hi,
Sorry about that and thank you for letting me know! This issue was reported and resolved with a new pip version uploaded.
Best regards, Anni
Hi,
I have noticed an error of arg_ranker.v2 when reporting the total ARG abundance in metagenomes. If the total ARG abundance is used in your research, please refer to https://github.com/caozhichongchong/arg_ranker for more details! I'm really sorry about this inconvenience! Please feel free to reach out to me if you have any questions.
Best regards, Anni
Hi Anni: Thanks for your greate tool. I can't find the data files stored in the example folder. So I tested it using my data, but there is something error when calling ARG_table.sum.py, and maybe caused by the incorrect file name in line 32 of ARG_table.sum.py. I fixed it and it worked. details: I changed "
for lines in open(args.d.replace('.structure.txt','.db.fasta.length'),'r'):
" by "for lines in open(args.d.replace('.structure.txt','.db.fasta.length.txt'),'r'):
" So, FYI.