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carpentries-incubator / managing-computational-projects

Managing Open and Reproducible Computational Projects
https://carpentries-incubator.github.io/managing-computational-projects
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Johav review 23 07 #102

Closed jcolomb closed 1 year ago

github-actions[bot] commented 1 year ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/carpentries-incubator/managing-computational-projects/compare/md-outputs..md-outputs-PR-102

The following changes were observed in the rendered markdown documents:

 06-ITtools.md                    |  18 ++-
 22_contentAndMotivation.md       |  43 ++++----
 23_Ensuring-reproducibility.md   |  64 ++++++-----
 24_SettingUp.md                  |  46 +++-----
 25_RDM.md                        |  19 ++--
 26_Coding.md                     |  56 +++++-----
 27_publications.md               | 232 +++++++++++++++++++++++++--------------
 28_conclusion.md                 |  15 ++-
 fig/DOI.jpg (new)                | Bin 0 -> 285803 bytes
 files/01-introduction.md         |  11 +-
 files/02-motivation.md           |  12 --
 files/03-overview.md             |  10 --
 files/04-reproducibility.md      |   2 -
 files/05-versioncontrol.md       |  40 +++----
 files/07-setup.md                |  18 ---
 files/08-collaborativeworking.md |  17 ---
 files/09-rdm.md                  |  19 ----
 files/10-documentation.md        |   2 -
 files/11-rigour.md               |   2 -
 files/12-analysis.md             |  15 ---
 files/13-codereview.md           |  21 +---
 files/14-codemodularity.md       |   2 -
 files/15-publication.md          | 165 ++++++++++++++++------------
 files/16-open.md                 |  15 ---
 files/17-citation.md             |  35 ++++--
 md5sum.txt                       |  16 +--
 26 files changed, 448 insertions(+), 447 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2023-08-04 10:01:34 +0000