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Open an issue in this repository to share Carpentries-style lessons and lesson ideas.
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Bioconductor data science intro #56

Closed lgatto closed 4 years ago

lgatto commented 4 years ago

Thank you for your interest in developing and sharing lesson materials! To submit lesson materials or suggest a topic for future curricular development, please answer the questions below. Our Curriculum Development Team will follow up to suggest next steps in your lesson's trajectory. Questions? Please email team@carpentries.org.

  1. What is the topic of your lesson or lesson proposal?

Adapt the Carpentries Ecology curriculum with examples and data more related to biomedical sciences, and start introducing the Bioconductor project. The target audience of this course would be complete beginners, i.e. no prior experience with R, who want to learn Bioconductor to analyse their own omics data.

  1. Do you already have a draft of your lesson? You're welcome to share materials at any stage of development. If you already have drafted materials, please include a link.

Yes - https://github.com/UCLouvain-CBIO/WSBIM1207, although it will be substantially modified.

  1. Do your materials conform to our Code of Conduct?

Yes

  1. Are your materials already on GitHub and do they use The Carpentries lesson template? (you can visit our lesson example to learn more about how to use our template).

No.

  1. If you answered "No" to either part of question 4, would you like our Curriculum Team to create a repository for you in The Carpentries Incubator?

Yes - please name that repo bioc-intro

  1. If you answered "Yes" to both parts of question 4, would you like to transfer your repository to The Carpentries Incubator? You will have Write access to the repository.

No

  1. If you answered "Yes" to either question 5 or 6, list the GitHub handles for people who should have Write access to your lesson. If you don't know how to answer this question, don't worry! We can always add collaborators later.

lgatto, rcastelo

  1. Any other information you would like us to have or questions you have for us?

This lesson would be the first lesson in an effort to develop Carpentry-style Bioconductor lessons.

Thank you for sharing your lesson with The Carpentries community!

tobyhodges commented 4 years ago

Thanks @lgatto. You and your collaborators should have received an invitation to join the carpentries-incubator organisation and the team of developers for this new lesson. I've created the "blank slate" repository for this lesson here: https://github.com/carpentries-incubator/bioc-intro

The README of that repository includes some instructions to get you started with creating the lesson. If you get stuck or would like any more information about anything relating to the Carpentries Incubator, lesson development, the lesson template, etc, please feel free to tag me in an Issue on the repository or contact me directly by email/Slack.