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carpentries-incubator / snakemake-novice-bioinformatics

Introduction to Snakemake for Bioinformatics
https://carpentries-incubator.github.io/snakemake-novice-bioinformatics
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Fasta transcriptome file is described as a fastq #35

Closed mwhamgenomics closed 2 years ago

mwhamgenomics commented 2 years ago

In Chapter 6: Handling awkward programs -> Exercise - adding Salmon as an alternative to Kallisto, the transcriptome file is referred to as <transcriptome as fastq>, even though it should be a fasta - which caught me out when I was following through the class.

tbooth commented 2 years ago

Well spotted, Murray. Thanks. Hope the course this week is going well in general.