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cbg-ethz / shorah

Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)
GNU General Public License v3.0
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No such file or directory #22

Closed nelkibs closed 8 years ago

nelkibs commented 8 years ago

Sorry to ask a very basic/beginner question. First time I am trying to use Shorah, still reading through the documentation. I think I have installed the package and its dependencies correctly, however when I try to run dec.py with input files in the same directory as the script using the command below

dec.py -b 9696_1#33.sorted.bam -f 9465113.fasta -w 300 -k

I get an error /bin/sh: ./b2w: No such file or directory What I am I getting wrong? Shoud I compile the /b2w_src/b2w.c first?

nelkibs commented 8 years ago

I figured out what the problem was.. Forgot the make command