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cellannotation
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cas-tools
Cell Annotation Schema Tools
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Enabled Overwriting of Existing Keys in uns Group
#100
ubyndr
closed
17 minutes ago
0
Add option to support filling empty slots with 'NA' during flattening for CAP
#99
dosumis
opened
4 hours ago
0
Cell set accession bug fix
#98
ubyndr
closed
1 hour ago
1
add_author_annotations NaN handling
#97
hkir-dev
closed
5 days ago
0
Empty columns in add_author_annotations
#96
hkir-dev
closed
5 days ago
0
NHP BG v2 modifications
#95
hkir-dev
closed
1 week ago
0
Added pulling author details from uns
#94
ubyndr
closed
6 days ago
0
Autogenerate & host cas-tools doc
#93
dosumis
opened
1 week ago
0
Review README and CLI docs
#92
dosumis
opened
1 week ago
0
Update README.md
#91
dosumis
closed
1 week ago
0
Create develop branch and follow proper GitHub branching rules
#90
evanbiederstedt
closed
1 week ago
0
Flexible table reading
#89
hkir-dev
closed
1 week ago
0
Flatten operation throws an exception but completes
#88
hkir-dev
closed
17 minutes ago
2
Add author annotations notebook
#87
hkir-dev
closed
2 weeks ago
0
CAS Schema title and description added
#86
hkir-dev
closed
2 weeks ago
0
Test data update for cas schema change
#85
hkir-dev
closed
3 weeks ago
0
Added support for breaking up taxonomy into separate files
#84
ubyndr
closed
3 weeks ago
0
WMB table flattening fix
#83
hkir-dev
closed
4 weeks ago
0
Marker validation has been added
#82
ubyndr
closed
4 weeks ago
0
Added author annotations adding functionality
#81
ubyndr
closed
1 month ago
0
Annotation review schema changes applied
#80
hkir-dev
closed
1 month ago
0
Update setup.py
#79
hkir-dev
closed
1 month ago
0
Add support for confusion matrix generation for reviewing annotation transfer
#78
dosumis
opened
1 month ago
0
author_annotation_fields support
#77
hkir-dev
closed
1 month ago
0
Add support for breaking up taxonomy into separate files - choosing taxonomy nodes to split on
#76
dosumis
closed
3 weeks ago
1
Linkml based RDF export support added
#75
hkir-dev
closed
1 month ago
0
Patch for cellannotation_metadata dictionary
#74
ubyndr
closed
2 months ago
0
Make cluster identifier column parametric
#73
hkir-dev
closed
2 months ago
0
Manage Ontology ID Assignment when cell_type has no 1:1 mapping with any author-defined cell set
#72
ubyndr
closed
4 weeks ago
3
Review field added to the CAS schema
#71
hkir-dev
closed
2 months ago
0
Spreadsheet to cas cl annotation refactoring
#70
ubyndr
closed
3 months ago
0
Missing dependencies fix in PyPi release
#69
ubyndr
closed
3 months ago
0
Notebooks review
#68
ubyndr
closed
3 months ago
1
Import annotation transfer onto single cells
#67
dosumis
opened
3 months ago
1
Support programatic addition of author category annotation columns from CSV/Dataframe
#66
dosumis
closed
1 month ago
0
Flattening with latest CAP schema
#65
ubyndr
closed
3 months ago
0
Alignment of flattening with latest CAP schema
#64
dosumis
closed
3 months ago
0
Redundant CL annotations remove bug fix
#63
ubyndr
closed
3 months ago
0
Improvements to abc to cas
#62
ubyndr
closed
3 months ago
0
Spreadsheet to cas refactoring
#61
ubyndr
closed
3 months ago
0
New hash accessions standard implemented
#60
hkir-dev
closed
3 months ago
0
Redundant CL annotations remove bug
#59
hkir-dev
closed
3 months ago
0
Improvements to ABC to CAS
#58
dosumis
closed
3 months ago
0
PyPi release missing dependencies
#57
dosumis
closed
3 months ago
0
AnnData to CAS should pull general CAS metadata (if possible)
#56
dosumis
closed
6 days ago
4
Docstring and documentation improvements for anndata2cas and spreadsheet2cas
#55
ubyndr
closed
3 months ago
0
"Module not found error" when trying to install cas-tools package
#54
AvolaAmg
closed
3 months ago
4
Write MapMyCellst to CAS converter
#53
dosumis
opened
3 months ago
0
Fixing auto accession detection
#52
hkir-dev
closed
3 months ago
0
Tabular flattening table names simplified
#51
hkir-dev
closed
3 months ago
0
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