The simulation results as they stand are not at all informative. The distribution of genetic divergence to sampling dates for simulations bears little resemblance to real data.
Assess the sensitivity of predicted dates to this variation.
[ ] variation in rates across sites (of the genome), handled in INDELIBLE
[ ] variation in rates over time - manipulate branch lengths in the tree used to simulate sequences
The simulation results as they stand are not at all informative. The distribution of genetic divergence to sampling dates for simulations bears little resemblance to real data.
Assess the sensitivity of predicted dates to this variation.