chris-mcginnis-ucsf MULTI-seq issues

chris-mcginnis-ucsf / MULTI-seq

R implementation of MULTI-seq sample classification workflow

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issues

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Are BClist.Robj and cell.id.vec.Robj files provided?

#33 xf2297 closed 1 year ago
0
Multi-seq for 5' VDJ 10x

#32 guillemsanchezsanchez1996 closed 1 year ago
0
Download of test data fails

#31 aghr closed 1 year ago
1
MULTIseq.preprocess function

#30 Alina-Ba closed 1 year ago
1
MULTISeqDemux function error: "No threshold found for CMO302

#29 JS0715 closed 1 year ago
1
cells being called HTO1_HTO1?

#28 bharris12 closed 1 year ago
1
MULTI-seq samples using cellrange

#27 Chris-lang478 closed 1 year ago
1
deMULTIplex for antibody-based cell hashing

#26 acv21 closed 1 year ago
2
Hide classifyCells Print-out

#25 Albert-Shuai closed 1 year ago
4
function MULTIseq.preProcess refers to a non-existing argument

#24 romunov closed 2 years ago
1
Barcode match

#23 alessiavalenti closed 2 years ago
4
Error when preProcessing HMEC example data

#22 YColino closed 2 years ago
2
Error when reading indrops3 data

#21 naumenko-sa closed 3 years ago
2
License for this repo?

#20 wflynny closed 3 years ago
2
MULTIseqDemux error

#19 shannjiang closed 3 years ago
0
Demux and cell numbers

#18 clairebio27 closed 3 years ago
0
tutorial data barcode check result

#17 lb15 closed 4 years ago
3
reclass.cells function throwing an error

#16 adiamb closed 1 year ago
2
cannot find barcode threshold

#15 MichaelPeibo closed 4 years ago
2
including "negative" population helpful for algorithm?

#14 tilofrei closed 4 years ago
2
focusing on 'multiplets'

#13 MichaelPeibo closed 4 years ago
3
removal of duplicated umis

#12 MichaelPeibo closed 4 years ago
1
No threshold found for barcode

#11 skannan4 closed 4 years ago
10
Code and data example for using the sample barcode UMI count matrix as input (We want to try the tool for cell hashing data)

#10 xhongyi closed 4 years ago
2
MULTI-seq and Seurat Integration

#9 alexfernandes8a closed 4 years ago
3
tutorial processing multi-seq raw fastqs?

#8 adiamb closed 4 years ago
4
Preprocessing Issue with cell.id.vec

#7 csawye01 closed 4 years ago
0
Issues with the MULTIseq.preProcess step

#6 pchamely1 closed 5 years ago
1
Install fails -- extra space in manual files

#5 dpcook closed 5 years ago
2
Feature Request: preProcess barcodes as variable instead of hard coded

#4 omansn closed 5 years ago
2
findReclassCells

#3 lk9-lnx closed 4 years ago
4
MULTIseq.preProcess

#2 lk9-lnx closed 5 years ago
5
Use return() instead of global assignment

#1 bbimber closed 5 years ago
0