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chrisquince / STRONG

Strain Resolution ON Graphs
MIT License
46 stars 9 forks source link

Packaging and release of SPAdes tools #40

Open snurk opened 5 years ago

Sebastien-Raguideau commented 5 years ago

Not sure where we are here, but in the mean time I'm trying to run it on a small vm with nothing installed, and I can't make it work by simply copying your cog_tools2 folder. It keep on crashing asking for libgomp.so.1.

cog_tools2/spades-gsimplifier: error while loading shared libraries: libgomp.so.1: cannot open shared object file: No such file or directory

So I installed libgcc and locate libgomp.so.1, tells me it is availlable in the conda env, but still not working. Any idea on how I can test it on this vm?

snurk commented 5 years ago

This is almost done. Code passed the code review and will be merged to spades master branch soon