chung-lab / SCAFE

Single Cell Analysis of Five'Ends
MIT License
45 stars 11 forks source link

failed to run scRNA-seq demo data #32

Open Guofeng527220 opened 7 months ago

Guofeng527220 commented 7 months ago

Hi, I just installed this SCAFE to our sever,but I can't get results of the sc.solo/clsuster directory when I run the "scafe.demo.test.run". At the same time I ran the my data that download from the SRA datadase, I also did not get the cluster results. I don't know why, and I have check all the dependencies of this software, I found ererything is ok, so I can't find any error on this. Whould you like to help me to solve this? This is cluster results,and it is null file.

image

This is the output on my screen.

image

the command is as below: cd /opt/SCAFE scafe.demo.test.run --overwrite=yes --run_outDir=./demo/output/