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clingen-data-model / clinvar-curation-reporting

@todo @Danielle
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Migrate "Non-contributory" to "Flagging candidate" in all ClinVar curation reports/functions #12

Closed larrybabb closed 10 months ago

larrybabb commented 11 months ago

All data for past curations need to be changed from "non-contributory" to "flagging candidate" All google sheet reports and bq functions that have app scripts, conditional formatting, filters, column functions, etc that reference "non-contributory" need to be updated to work with this new term. These sheets include but are not necessarily limited to:

CvCuration Annotations CvCuration Review & Submit CvCuration Statistics ClinVar ClinSig Outliers

BQ functions: curated_variation_as_of() cvc_curations_as_of() cvc_curations_impact_as_of() cvc_submitter_curations_as_of()

larrybabb commented 11 months ago

@dazzariti please verify that the 4 downstream reports are still working as expected.

dazzariti commented 11 months ago

@larrybabb I see "Flagging Candidate" replace "Non Contributory" in all the reports except ClinVar ClinSig Outliers - on the Outliers tab "non-contributory" is still a value in column N - just confirming that's intended.