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compomics
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peptide-shaker
Interpretation of proteomics identification results
http://compomics.github.io/projects/peptide-shaker.html
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Search GUI Memory Issues
#536
EthanHasenoehrl
opened
2 weeks ago
3
MSFragger search result visualization
#535
Baopusr
opened
3 months ago
6
No Intensities data in Fraction section
#534
HelllenaZ
closed
4 months ago
2
Peptide Shaker only imports rank-1 PSMs and ignores the rest?
#533
ChrissiKalk97
closed
4 months ago
1
Exporting rank-1 PSM with Delta Scores
#532
marinacd
closed
4 months ago
2
Protein filter Validation = Confident error
#531
kbarylyuk
closed
6 months ago
3
Peptide Shaker processing stops.
#530
marylouisedc
closed
6 months ago
2
pep.xml file parsing error
#529
marinacd
closed
6 months ago
3
Writing mzidentML files
#528
prao123
closed
7 months ago
3
PeptideShaker issue - failed to load SearchGUI results
#527
mryanshi
closed
8 months ago
3
Error in PTM mapping
#526
elrubio
opened
9 months ago
1
No identification results
#525
fiuzatayna
closed
9 months ago
2
ConcurrentModificationException when loading Mascot DAT files
#524
elrubio
closed
9 months ago
8
Mascot compatibility documentation not up-to-date
#523
elrubio
closed
9 months ago
2
Peptide Shaker Processing Cancelled. See peptide Shaker Log for deatils. How to get rid of this problem
#522
Annesha-1312
closed
6 months ago
2
Canceled import from search gui
#521
Parniyan-M
closed
10 months ago
5
Failed to open SearchGUI
#520
JesusCastano01
closed
11 months ago
1
SearchGUI not found in null
#519
dishajawadekar
closed
11 months ago
0
Java update warning message even after Java updated
#518
MNTNguyen
closed
9 months ago
2
An error occurred: Not enough representative modification sites found.
#517
danyunghsu
closed
10 months ago
4
PeptideShaker won't open file
#516
HarryTaylor1296
closed
1 year ago
4
Missing spectrum titles in MS Amanda output
#515
JuneCoco
closed
1 year ago
8
No identification results generated from peptideshaker
#514
esraaelmligy
closed
1 year ago
3
Exporting Extended PSM Report failed
#513
ClaSofMag
closed
9 months ago
3
PeptideShaker importing error from SearchGUI output
#512
fengx90
opened
1 year ago
3
An error occurred while loading the spectrum file(s)
#511
esraaelmligy
closed
1 year ago
3
Peptideshaker issue with the identification result file 'searchGUI_input.txt' not being recognized.
#510
JuneCoco
closed
1 year ago
3
"spectrumMatch" is null error when trying to view identifications from searchGUI files
#509
mlmarshall
opened
1 year ago
1
export algorithm score
#508
danyunghsu
closed
1 year ago
4
PeptideShaker output in tabular format
#507
trishorts
closed
1 year ago
5
saint express bait name from peptide shaker
#506
Bakhtiyarlp
closed
1 year ago
1
how to perform significance test on experimental versus control spectral count files from peptideshaker?
#505
Bakhtiyarlp
closed
1 year ago
1
Peptideshaker Error 203
#504
TPawla
closed
1 year ago
15
error in processing of msgf.mzid files
#503
Bakhtiyarlp
closed
1 year ago
4
Fails to start up completely after initially did
#502
bujar-klaiqi
closed
1 year ago
8
Null pointer exception during import from searchgui
#501
mdondrup
closed
1 year ago
11
Error exporting custom PTMs
#500
juank1892
closed
1 year ago
2
"No PeptideShaker project was found in the zip file"
#499
alexander-stolz-fh
closed
1 year ago
3
Failed to put two fixed modifications
#498
KKKKK-tech
closed
1 year ago
5
NullPointerException in Peptideshaker (searchGUI runs fine)
#497
lukethompson16
closed
1 year ago
4
Peptide-shaker doesn't progress from "Importing PSMs from mgf.comet.pep.xml.gz"
#496
MigRibe
opened
1 year ago
27
Peptideshaker run issues
#495
carolinelennartsson
opened
1 year ago
3
exte
#494
carolinelennartsson
closed
1 year ago
0
Parsing mzIdentML is whitespace sensitive
#493
lazear
opened
1 year ago
3
PeptideShaker importing issues + SearchGUI writing output to Peptideshaker with ms-gf+ search
#492
carolinelennartsson
closed
1 year ago
2
Modifications view: mirrored spectrum
#491
szabzola
closed
1 year ago
7
Default Protein Reports exits with a fatal error
#490
iquasere
closed
1 year ago
8
Installation issue of peptide shaker with Java
#489
EmilieCarneiro
closed
1 year ago
1
Failed to start PeptideShaker
#488
fabiocsn
closed
1 year ago
9
Go Analysis
#487
bargarge
closed
1 year ago
4
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