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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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KP.3.1.1+Orf9b:T79I+S:D1260Y(149 seqs, >10 places) #2823

Open xz-keg opened 2 weeks ago

xz-keg commented 2 weeks ago

From https://github.com/sars-cov-2-variants/lineage-proposals/issues/2094

KP.3.1.1+C28519T(Orf9b:T79I)+T13120C,G25340T(S:D1260Y)

Besides the spike and orf9b mutation, it is also worth noting that the T13120C mutation is just besides the A13121T mutation defining of KP.3.1.1.

GISAID query: C28519T, T13120C, G25340T No. of seqs: 126(Denmark 1 France 2 Greece 1 Ireland 1 Netherlands 2 USA 34(CA, CO,GA, IA, MI, MN, NJ, NY, OH, VA) Canada 85(AB,BC,NB,NS,ON,QC))

First: EPI_ISL_19310503, Canada-QC, 2024-7-21 Latest: EPI_ISL_19521497, Canada-NB, 2024-10-21

usher image

xz-keg commented 1 week ago

149, also in UK

FedeGueli commented 1 week ago

Looking at non canadian samples it seems growing worth proposing it ah scratch already in this repo.

Over-There-Is commented 1 day ago

174