Dear FEST group,
I am traying to use FEAST with a dataset that includes multiple sinks (A, B and C, each of them with replicate samples) teach tested with distinct sources (a different one with replicate samples for each set of sinks). I set different_sources_flag = 1, but I guess I did something wrong when preparing the metadata and count imput table, as I get the following errors:
Error in if (sum(x[i, ]) > maxdepth) { :
missing value where TRUE/FALSE needed
In addition: Warning messages:
1: In matrix(sinks, nrow = 1, ncol = dim(totalsource)[2]) :
data length differs from size of matrix: [32736 != 1 x 1364]
2: In matrix(sinks, nrow = 1, ncol = dim(totalsource)[2]) :
data length differs from size of matrix: [32736 != 1 x 1364]
3: In matrix(sinks, nrow = 1, ncol = dim(totalsource)[2]) :
data length differs from size of matrix: [16368 != 1 x 1364]
Dear FEST group, I am traying to use FEAST with a dataset that includes multiple sinks (A, B and C, each of them with replicate samples) teach tested with distinct sources (a different one with replicate samples for each set of sinks). I set different_sources_flag = 1, but I guess I did something wrong when preparing the metadata and count imput table, as I get the following errors:
Error in if (sum(x[i, ]) > maxdepth) { : missing value where TRUE/FALSE needed In addition: Warning messages: 1: In matrix(sinks, nrow = 1, ncol = dim(totalsource)[2]) : data length differs from size of matrix: [32736 != 1 x 1364] 2: In matrix(sinks, nrow = 1, ncol = dim(totalsource)[2]) : data length differs from size of matrix: [32736 != 1 x 1364] 3: In matrix(sinks, nrow = 1, ncol = dim(totalsource)[2]) : data length differs from size of matrix: [16368 != 1 x 1364]
Any suggestions?