cytomining / cytominer

Methods for Image-Based Cell Profiling
https://cytomining.github.io/cytominer/
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Documentation of extract_subpopulations is not up-to-date #112

Closed cells2numbers closed 7 years ago

cells2numbers commented 7 years ago

The documentation of extract_subpopulations says

extract_subpopulations extracts the clusters enriched/de-enriched in a given set w.r.t a reference set. 

Actually, the cluster centers are calculated using data points from the reference and the population data frame.

shntnu commented 7 years ago

How is this?

@cells2numbers @mrohban

#' \code{extract_subpopulations} extracts clusters from population and reference sets 
#' and reports the frequency of points in each cluster for the sets
cells2numbers commented 7 years ago

That is actually what it is doing :)

shntnu commented 7 years ago

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