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daler / gffutils

GFF and GTF file manipulation and interconversion
http://daler.github.io/gffutils
MIT License
289 stars 78 forks source link

Use pytest instead of the Py3.11 incompatible nose #200

Closed mr-c closed 2 years ago

mr-c commented 2 years ago

"Nose" is no longer developed for many years now and doesn't work with Python 3.11

daler commented 2 years ago

This has been on my list, thank you for providing the impetus :)

CI and dependencies need to be updated; I'll get that working in this PR.

mr-c commented 2 years ago

This has been on my list, thank you for providing the impetus :)

You are welcome!

CI and dependencies need to be updated; I'll get that working in this PR.

Great, I'll leave it for you from here; thanks!

daler commented 2 years ago

Not sure why the tests aren't running; I didn't think they were disabled from a fork but they might be anyway. Going to merge this into a separate temp branch to see how that goes.