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databio / pepatac

A modular, containerized pipeline for ATAC-seq data processing
http://pepatac.databio.org
BSD 2-Clause "Simplified" License
54 stars 15 forks source link

Use RGC #111

Closed vreuter closed 5 years ago

vreuter commented 5 years ago

What's a good test case?

nsheff commented 5 years ago

I think this looks good for now. @jpsmith5 any comments?

vreuter commented 5 years ago

@jpsmith5 is this good to merge?

nsheff commented 5 years ago

It's fine with me to merge to dev, but before this goes into the wild we will want this PR to be finished:

https://github.com/databio/refgenie/pull/28

or maybe we just need the refgenconf one? https://github.com/databio/refgenconf/milestone/1