Update 11 packages

[carpentries-bot]

:robot: This is an automated build

This will update 11 packages in your lesson with the following versions:

# NEW OR REMOVED PACKAGES -------------------------------
- mgcv  [required by ggplot2]
- lattice   [0.22-6 -> *]
- Matrix    [1.7-0 -> *]
- mgcv      [1.9-1 -> *]
- nlme      [3.1-164 -> *]
- R         [4.4.0 -> 4.4.1]

# CRAN -----------------------------------------------------------------------
- cli        [3.6.2 -> 3.6.3]
- crayon     [repo: RSPM -> CRAN; ver: 1.5.2 -> 1.5.3]
- digest     [0.6.35 -> 0.6.36]
- evaluate   [0.23 -> 0.24.0]
- MASS       [7.3-60.2 -> 7.3-61]
- rlang      [1.1.3 -> 1.1.4]
- xfun       [0.44 -> 0.45]
- mgcv       [* -> 1.9-1]
- nlme       [* -> 3.1-165]

# RSPM -----------------------------------------------------------------------
- lattice    [* -> 0.22-6]
- Matrix     [* -> 1.7-0]

:stopwatch: In a few minutes, a comment will appear that will show you how the output has changed based on these updates.

If you want to inspect these changes locally, you can use the following code to check out a new branch:

git fetch origin update/packages
git checkout update/packages

• Auto-generated by create-pull-request on 2024-07-02

[github-actions[bot]]

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

• :dart: correct output
• :framed_picture: correct figures
• :question: new warnings
• :bangbang: new errors

Rendered Changes

:mag: Inspect the changes: https://github.com/datacarpentry/R-ecology-lesson/compare/md-outputs..md-outputs-PR-889

The following changes were observed in the rendered markdown documents:

 ...isualizing-ggplot-rendered-boxplot-jitter-1.png | Bin 406964 -> 407437 bytes
 ...ualizing-ggplot-rendered-boxplot-outliers-1.png | Bin 403756 -> 404023 bytes
 ...lot-rendered-customizing-challenge-answer-1.png | Bin 774458 -> 780473 bytes
 ...visualizing-ggplot-rendered-element-blank-1.png | Bin 652011 -> 651248 bytes
 fig/visualizing-ggplot-rendered-facet-wrap-1.png   | Bin 558548 -> 559035 bytes
 fig/visualizing-ggplot-rendered-fill-na-1.png      | Bin 637792 -> 634805 bytes
 fig/visualizing-ggplot-rendered-geom-color-1.png   | Bin 652375 -> 655424 bytes
 fig/visualizing-ggplot-rendered-global-color-1.png | Bin 646863 -> 648882 bytes
 fig/visualizing-ggplot-rendered-labels-1.png       | Bin 798250 -> 800445 bytes
 ...visualizing-ggplot-rendered-legend-remove-1.png | Bin 807343 -> 812981 bytes
 ...isualizing-ggplot-rendered-reverse-layers-1.png | Bin 506125 -> 502157 bytes
 fig/visualizing-ggplot-rendered-text-size-1.png    | Bin 652018 -> 653698 bytes
 fig/visualizing-ggplot-rendered-theme-bw-1.png     | Bin 655726 -> 655113 bytes
 ...sualizing-ggplot-rendered-unnamed-chunk-1-1.png | Bin 633067 -> 633120 bytes
 ...g-ggplot-rendered-violin-challenge-answer-1.png | Bin 569279 -> 564895 bytes
 ...ggplot-rendered-violin-challenge-answer-2-1.png | Bin 567691 -> 565201 bytes
 ...-data-rendered-date-plot-challenge-answer-1.png | Bin 454872 -> 454556 bytes
 md5sum.txt                                         |   2 +-
 18 files changed, 1 insertion(+), 1 deletion(-)

What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2024-09-03 00:15:00 +0000