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daviesdrew / variantcalling

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Ensure that conda env bin path exists for Singularity image #11

Open peterk87 opened 4 years ago

peterk87 commented 4 years ago

https://github.com/daviesdrew/variantcalling/blob/d452f8cc1a6901c818d997e4c4bbdc98af42c1a2/singularity/Singularity_1.0.0#L11

should be 

PATH=/opt/conda/envs/variantcalling-1.0.0/bin$PATH

if name of Conda env is changed as per #9

daviesdrew commented 4 years ago

PATH has been altered as suggested.