coderabbitai[bot]
commented
1 month ago Walkthrough
## Walkthrough This update enhances code readability and maintainability across multiple files in the project. Key changes include improved error handling, streamlined command executions, and consistent variable naming. These modifications aim to enhance clarity for future developers without altering the original functionality, thereby simplifying the code structure and improving overall robustness. ## Changes | File Path | Change Summary | |-------------------------------------|------------------------------------------------------------------------------------------------| | `dpdispatcher/contexts/ssh_context.py` | Refactored `write_file` method for better error handling; improved `_get_files` method with streamlined command construction and enhanced error messaging. | | `dpdispatcher/machines/pbs.py` | Renamed `sge_pe_name` to `pe_name` for clarity; updated string formatting to f-strings; revised `resources_subfields` method to include new `job_name` argument and updated documentation accordingly. | ## Sequence Diagram(s) ```mermaid sequenceDiagram participant User participant PBSDispatcher participant SSHContext User->>PBSDispatcher: Request script generation PBSDispatcher->>PBSDispatcher: Generate script header PBSDispatcher->>User: Return script header User->>SSHContext: Check SSH status SSHContext->>SSHContext: Ensure SSH is alive SSHContext->>User: Return status ```Recent review details
**Configuration used: CodeRabbit UI** **Review profile: CHILL**Commits
Files that changed from the base of the PR and between 7bbc4857844d854a6ad7a86fef23a0b3679b61fb and bca9728122a88f684f31cc7b9d155c2a29fda0d4.Files selected for processing (2)
* dpdispatcher/contexts/ssh_context.py (6 hunks) * dpdispatcher/machines/pbs.py (5 hunks)Additional context used
GitHub Check: codecov/patch
dpdispatcher/machines/pbs.py
[warning] 218-218: dpdispatcher/machines/pbs.py#L218 Added line #L218 was not covered by testsdpdispatcher/contexts/ssh_context.py
[warning] 298-298: dpdispatcher/contexts/ssh_context.py#L298 Added line #L298 was not covered by tests --- [warning] 812-815: dpdispatcher/contexts/ssh_context.py#L812-L815 Added lines #L812 - L815 were not covered by tests --- [warning] 817-817: dpdispatcher/contexts/ssh_context.py#L817 Added line #L817 was not covered by tests --- [warning] 819-821: dpdispatcher/contexts/ssh_context.py#L819-L821 Added lines #L819 - L821 were not covered by tests --- [warning] 969-970: dpdispatcher/contexts/ssh_context.py#L969-L970 Added lines #L969 - L970 were not covered by tests --- [warning] 972-972: dpdispatcher/contexts/ssh_context.py#L972 Added line #L972 was not covered by tests --- [warning] 976-976: dpdispatcher/contexts/ssh_context.py#L976 Added line #L976 was not covered by tests --- [warning] 981-985: dpdispatcher/contexts/ssh_context.py#L981-L985 Added lines #L981 - L985 were not covered by tests --- [warning] 988-988: dpdispatcher/contexts/ssh_context.py#L988 Added line #L988 was not covered by tests
Additional comments not posted (5)
dpdispatcher/machines/pbs.py (1)
`270-270`: **LGTM!** The string formatting has been updated to f-strings, improving readability.dpdispatcher/contexts/ssh_context.py (4)
`298-302`: **LGTM!** The additional exception handling improves robustness.--- `812-821`: **LGTM! But verify the function usage in the codebase.** The code changes are approved. However, ensure that all function calls to `write_file` are tested.Tools
GitHub Check: codecov/patch
[warning] 298-298: dpdispatcher/contexts/ssh_context.py#L298 Added line #L298 was not covered by testsVerification successful
--- **LGTM! But verify the function usage in the codebase.** The code changes are approved. The function `write_file` is adequately tested and integrated into the codebase, as evidenced by its presence in multiple test files and other parts of the codebase.Scripts executed
The following scripts were executed for the analysis: Script: ```shell #!/bin/bash # Description: Verify all function calls to `write_file` are tested. # Test: Search for the function usage. Expect: Only occurrences of the new signature. rg --type python -A 5 $'write_file' ``` Length of output: 65 --- Script: ```shell #!/bin/bash # Description: Verify all function calls to `write_file` are tested. # Test: Search for the function usage. Expect: Only occurrences of the new signature. rg --type py -A 5 $'write_file' ``` Length of output: 18112--- `362-373`: **LGTM! But verify the function usage in the codebase.** The code changes are approved. However, ensure that all function calls to `arginfo` are tested. --- `969-989`: **LGTM! But verify the function usage in the codebase.** The code changes are approved. However, ensure that all function calls to `_get_files` are tested.Tools
GitHub Check: codecov/patch
[warning] 812-815: dpdispatcher/contexts/ssh_context.py#L812-L815 Added lines #L812 - L815 were not covered by tests --- [warning] 817-817: dpdispatcher/contexts/ssh_context.py#L817 Added line #L817 was not covered by tests --- [warning] 819-821: dpdispatcher/contexts/ssh_context.py#L819-L821 Added lines #L819 - L821 were not covered by testsVerification successful
--- **Function usage verified:** The `_get_files` function in `SSHContext` is indirectly tested through the test cases for the `SSHContext` class found in `tests/test_ssh_context.py`. This ensures that the function is covered by tests. - `tests/test_ssh_context.py`Scripts executed
The following scripts were executed for the analysis: Script: ```shell #!/bin/bash # Description: Verify all function calls to `_get_files` are tested. # Test: Search for the function usage. Expect: Only occurrences of the new signature. rg --type python -A 5 $'_get_files' ``` Length of output: 65 --- Script: ```shell #!/bin/bash # Description: Verify all function calls to `_get_files` are tested. # Test: Search for the function usage. Expect: Only occurrences of the new signature. rg --type py -A 5 '_get_files' ``` Length of output: 910 --- Script: ```shell #!/bin/bash # Description: Verify that the `_get_files` function and its caller are covered by tests. # Test: Search for test cases covering `_get_files` or its caller. rg --type py '_get_files' tests/ rg --type py 'self._get_files' tests/ ``` Length of output: 70 --- Script: ```shell #!/bin/bash # Description: Verify that the `SSHContext` class or the module `ssh_context.py` is covered by tests. # Test: Search for test cases covering the `SSHContext` class or the module `ssh_context.py`. rg --type py 'SSHContext' tests/ rg --type py 'ssh_context' tests/ ``` Length of output: 2033Tools
GitHub Check: codecov/patch
[warning] 969-970: dpdispatcher/contexts/ssh_context.py#L969-L970 Added lines #L969 - L970 were not covered by tests --- [warning] 972-972: dpdispatcher/contexts/ssh_context.py#L972 Added line #L972 was not covered by tests --- [warning] 976-976: dpdispatcher/contexts/ssh_context.py#L976 Added line #L976 was not covered by tests --- [warning] 981-985: dpdispatcher/contexts/ssh_context.py#L981-L985 Added lines #L981 - L985 were not covered by tests --- [warning] 988-988: dpdispatcher/contexts/ssh_context.py#L988 Added line #L988 was not covered by tests
thangckt
codecov[bot]
this PR solves problem #471 and have some improvements
Summary by CodeRabbit
Summary by CodeRabbit
New Features
Refactor
resources_subfieldsmethod.Style