Heatmap gene deletion issues

deeptools / deepTools

Tools to process and analyze deep sequencing data.

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Closed feasiblee closed 1 year ago

feasiblee commented 1 year ago

 This heatmap looks like some black bands, please what causes it and how to fix it, thank you.

matrix1_RNAPII_S7P_TSS_10K_Heatmap_10K

WardDeb commented 1 year ago

Hi,

Have a look at the flag --missingDataAsZero in the computeMatrix function. Feel free to re-open if this doesn't fix your issue.

Kind regards,

WardDeb