A curated list of awesome resources related to COVID19.
Datasets and machine learning models related to COVID-19.
Pneumonia related Kaggle Datasets - A collection of medical imaging (chest X-ray or CT) datasets and other resources.
Coronavirus disease 2019 (COVID-19) article on Radiopaedia
This section collects COVID-19 and pneumonia related chest x-ray datasets.
TorchXrayVision is a python library of chest X-ray datasets and models providing a standardized interface for some of the datasets listed below.
Name | Publisher | Type | Images | Classes | Download links |
---|---|---|---|---|---|
COVID-19 image data collection | Joseph Paul Cohen | Chest x-ray / CT | 158 (updating) | COVID-19, SARS, Viral Pneumonia, etc. | http |
NIH Clinical Center chest x-ray datasets | National Institutes of Health | Chest x-ray | 100,000+ | 14 categories including pneumonia | http; torrent: full, 224x224 |
BIMCV-COVID19, BIMCV-PadChest | Medical Imaging Bank of the Valencia Region | Chest x-ray | 160,000+ | 174 labels (no COVID-19 yet) | http; torrent: full, 224x224 |
RSNA Pneumonia Detection Challenge | Radiological Society of North America | chest x-ray | 26,684 | pneumonia object detection bboxes | kaggle (DICOM), torrent (jpeg) |
CheXpert | Stanford Machine Learning Group | chest x-ray | 224,316 | 14 categories including pneumonia | http (registration needed) |
MIMIC-CXR-JPG | Johnson et al. (2019) | chest x-ray | 300,000+ | 14 categories including pneumonia | http (credentialing needed) |
Open-i | National Library of Medicine | chest x-ray | 7,470 | http: png, DICOM, labels | |
COVID19 High quality images | theroyakash | Chest x-ray | 338 | COVID-19, Viral Pneumonia / Normal | kaggle |
Chest X-Ray Images (Pneumonia) | Paul Mooney | Pediatric chest x-ray | 5,863 | Pneumonia / Normal | kaggle |
Articles, blog posts describing a proposed model:
Collection of case datasets for analyzing the dynamics of the outbreak.
Scope | Publisher | Granularity | Updated | Fields1 | Format | Dataset |
---|---|---|---|---|---|---|
International level | ||||||
worldwide | Johns Hopkins CSSE | countries2 | daily | 1, 2, 3 | csv | link |
worldwide | European Centre for Disease Prevention and Control | countries | daily | 1, 3 | xls | link |
Country level | ||||||
Brazil | Brasil.io | state, cities | daily | 1, 3 | csv, API, web | link |
Canada | COVID-19 Canada Open Data Working Group | provinces | daily | 1, 2, 3, 7 | Google Sheets | link |
Italy | Protezione Civile | national, regional, provinces | daily | n, r: 1, 2, 3, 4, 5, 6, 7; p: 1 | csv, json | link |
United States | The COVID Tracking Project | states | daily | 1, 3, 7 | Google Sheets, csv, json, GraphQL | link |
[1] Fields explanation:
[2] provinces for China, US, Canada, Australia
Official pages for monitoring the national outbreaks with reported cases. English version is provided, if found.
Americas
Asia
Australia and Oceania
Europe
Dashboards visualizing the dynamics of the outbreak in different geographic areas.
Worldwide
Country level
A collection of scientific papers related to COVID-19 relevant from the data science point of view.
Computer Tomography (CT) images
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